Achromobacter veterisilvae: WHX56_03620
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Entry
WHX56_03620 CDS
T10582
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
avh Achromobacter veterisilvae
Pathway
avh00521
Streptomycin biosynthesis
avh00523
Polyketide sugar unit biosynthesis
avh00525
Acarbose and validamycin biosynthesis
avh00541
Biosynthesis of various nucleotide sugars
avh01100
Metabolic pathways
avh01110
Biosynthesis of secondary metabolites
avh01250
Biosynthesis of nucleotide sugars
Module
avh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
WHX56_03620 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
WHX56_03620 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
WHX56_03620 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
WHX56_03620 (rfbB)
00525 Acarbose and validamycin biosynthesis
WHX56_03620 (rfbB)
Enzymes [BR:
avh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
WHX56_03620 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WXR74597
UniProt:
A0ABZ2S8J3
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All DBs
Position
782462..783523
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AA seq
353 aa
AA seq
DB search
MSIVVTGGAGFIGSNFVLDWLAQRDEPVVTLDKLTYAGNPGNLASLRGDARHTLVQGDIG
DPATVSRLLAAHAPRAVINFAAETHVDRSIADPDAFVQANIVGTSRLLTAVRDYWAGLEP
AARAGFRFLHVSTDEVYGSLEAGAPAFTETARYAPNSPYSASKAASDHLVRAFHTTYGLP
VLTSNCSNNYGPYQFPEKLIPLVIHNALAGKPLPIYGDGLQIRDWLYVADHCDAIRKILE
AGEPGTTFNVGGWNEKTNLEVVRQLCALLDELSPRPDGRPYAAQIAHVADRPGHDRRYAV
DAGRLQRALGWTPAETFETGLRKTVLWYLSHPRWVADVTSGAYRDWAREQYET
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtcgtcaccggcggagccggcttcatcggctccaatttcgtactggattgg
cttgcccagcgcgacgagcccgtcgttacgctggacaaactcacgtacgccggcaacccc
ggcaacctcgcctctctgcgcggcgacgcaaggcataccttggtccagggcgacatcggc
gatcccgcaacggtctcgcggctgctggccgcgcatgcgccccgcgcggtgatcaacttc
gccgcggaaacccacgtcgaccgctccatcgccgaccccgacgccttcgtccaggccaac
atcgtcgggacctcgcgcctgctgacggccgtgcgcgactactgggccgggctggagccc
gccgcccgcgccggcttccggttcctgcacgtttccaccgacgaggtgtacggttcgctg
gaagccggggccccggccttcaccgaaacggcgcgctacgcgccgaacagcccctattcc
gccagcaaggcggcaagcgaccatctggtccgggccttccacacgacctacggcctgccg
gtgctgacgtcgaactgctcgaacaactacggcccctaccagttcccggaaaagctcatc
cccctggtcatccacaacgcgctcgccggcaagccgctgccgatctacggagacggcctg
cagatccgggactggctatacgtggccgaccattgcgacgcgatccgcaagatactggag
gcgggcgagccgggcacgactttcaacgtgggcggctggaacgaaaagaccaatcttgaa
gtcgtgcggcaactgtgcgcgctgctcgatgaactcagcccccggcccgacggccggccc
tacgcggcccagatcgcgcacgtcgcggaccgccccggacacgaccgccgctacgcggtc
gacgccggccgcctgcaacgcgcgctgggctggacgcccgcggaaacgttcgaaaccggt
ctgcgaaaaacggtactctggtacctgagccacccgcggtgggtggcggacgtcaccagt
ggcgcctatcgcgactgggcaagagaacagtacgagacttag
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