Achromobacter veterisilvae: WHX56_04950
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Entry
WHX56_04950 CDS
T10582
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
avh Achromobacter veterisilvae
Pathway
avh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WHX56_04950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avh02000
]
WHX56_04950
Transporters [BR:
avh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
WHX56_04950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
WXR74847
UniProt:
A0ABZ2S1M8
LinkDB
All DBs
Position
1055554..1056582
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AA seq
342 aa
AA seq
DB search
MGKVLAVLAAATVAAGLSANAAAQKLVVAGYGGSFEDIMRKDIFPPFAKQHGVELDYVAG
NSTNTVARLQAQKSNQQIDVAIIDDGPMYQAIALGFCEPIKGLPADDIYGTARYKDDKAV
AIGIVATGIMYNKKVFDEKKWAPPASWKDLKDPKYKKQLVIPPLNNTYGLHALVEYAREG
GGGEKKIDPGFATFKNEVGPNVLVYEPSPGKMTELFSSGQAVISVWGSGRVKAFADTGFP
VGFVYPQEGAYALLSSVCPVAKSNANPLAQAFVQYLVSPEVQEKLATAYGYGPVNKKAKV
TDDPRVPLPIGKRAADLIVIDWDTVNQNRDDWNKRWTREIER
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggtactcgcagtgctagcggcggcaacggtggccgccggactcagcgccaat
gcggcggcgcagaaactggtggtggccggatacggcggctctttcgaagacatcatgcgc
aaggacatcttcccgcccttcgccaagcagcacggcgtcgagctggactatgtggccggc
aactccaccaacacggtggcgcggctgcaggcgcagaaaagcaatcagcagatcgacgtg
gccatcatcgacgacggccccatgtaccaggccatcgcgctgggcttttgcgaacccatc
aagggactgccggccgacgacatctacggcacggcgcgctacaaggacgacaaggcggtg
gccatcggcatcgtggcgaccggcatcatgtacaacaagaaggtcttcgacgaaaagaag
tgggcgccgcccgcctcgtggaaggacctgaaggatcccaagtacaagaagcaactggtg
atcccgccgctgaacaacacctacggcctgcacgcgctggtggaatacgcgcgcgaaggc
ggcggcggcgaaaagaagatcgatcccggcttcgccaccttcaagaacgaggtcggcccg
aacgtgctggtctatgaaccctcgccgggcaagatgacggagctgttctccagcggccag
gcggtaatctcggtctggggcagcggccgcgtcaaggccttcgccgataccggattcccg
gtgggcttcgtgtatccgcaggaaggcgcctacgccctgctgtcgtccgtctgcccggtc
gccaagtccaatgccaacccgcttgcccaggccttcgtgcagtacctggtctctcccgag
gtgcaggagaagctggcgaccgcctacggctacggcccggtcaacaagaaagccaaggtc
accgacgatccccgcgtgccgctgcctatcggcaagcgggccgccgacctgatcgtgatc
gattgggacacggtcaaccagaatcgggacgactggaacaagcgctggacgcgggaaatc
gagcgctga
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