Achromobacter veterisilvae: WHX56_06630
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Entry
WHX56_06630 CDS
T10582
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
avh Achromobacter veterisilvae
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avh03000
]
WHX56_06630
Transcription factors [BR:
avh03000
]
Prokaryotic type
Helix-turn-helix
Other families
WHX56_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
Sigma54_activ_2
AAA_lid_14
HTH_30
AAA_5
Mg_chelatase
HTH_23
AAA_2
AAA_3
HTH_28
HTH_29
HTH_Tnp_1
AAA
AAA_16
Xre-like-HTH
HTH_IclR
HTH_1
Hpr_kinase_C
TsaE
Motif
Other DBs
NCBI-ProteinID:
WXR75172
UniProt:
A0ABZ2S8B1
LinkDB
All DBs
Position
1418366..1420243
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AA seq
625 aa
AA seq
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MATHSRQHALTQARLLFNQQGAVPGGMVAEPILRSWRRCADLGFDMRGVRRAELMTQGEL
REAQQRNEALRRMSEPAMSLLRGQAGGSGSLVILSDAQGLVLDSGGDIEFAQRASRVALM
PGAPWDEAAAGTNAIGTALVEGRPIAVHGAEHYFEPNRILTCAAVPISDGEGRTLGVLDL
SSQARELRPDVLELVRAAVDLIEHRLFEQAYEQQAVLRLHAHHSGLGLPGEGLLAFEGDL
LVGANRCALQALGLAPTALGVYRYADVFDGDIERCPDAAGRVQARSGAVYHARLRWPRSR
ARQAPALPALPPADAARPAGPNFDAETLGALARAVHLSDAGVSILLQGETGVGKEVFARQ
LHARGRRAAGPFVAVNCAALPESLIESELFGYEDGAFTGARRQGSKGLLRQAHGGVLFLD
EIGDMPLILQSRLLRVLQTREVSPLGAARPVPVDFALVCATHRPLAHEGPDAPVRPDLYF
RIAEYTVTLEPLRARADRLELLRGLWAAHGAGPLLPPDIEAILLAYPWPGNYRQMVAVLR
TLHVLAGPAGRVDAAMLPADIRGAQAGPPPADRGDPADLKVMADSAIRDALAAHGGNVSR
AARALGVHRSTLYRRAAALAPPRTR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggccactcattcccgtcagcacgcgctgacgcaagcgcgcctgctgttcaaccagcag
ggcgccgtgcccggcggcatggtcgccgagcccatcctgcgatcgtggcggcgctgcgcc
gacctgggcttcgacatgcgcggcgtgcgccgcgccgaactcatgacgcagggcgaactg
cgcgaagcgcagcagcgcaacgaggcgctgcgccggatgtccgaacccgccatgtccctg
ctgcgcggccaggccggcggcagcggcagcctggtgatcctgtccgacgctcaggggctg
gtgctggacagcggcggcgacatcgaattcgcccagcgcgcctcgcgcgtcgcgctcatg
cccggcgcgccctgggacgaggccgcggcgggcaccaacgccatcggcaccgcgctggtg
gaaggccggcccatcgcggtccatggcgcggaacactatttcgaaccgaaccgcatcctg
acctgcgcggcggtccccatctccgacggcgagggccgcacgctgggcgtgctggacctg
tccagccaggcgcgcgagctgcggcccgatgtgcttgaactggtgcgcgcggcagtggac
ctgatcgagcaccgcctgttcgagcaggcctacgaacagcaggccgtactgcggctgcac
gcccatcattccggcctgggcctgccgggcgaggggctgctggccttcgagggcgacctg
ctggtcggcgccaaccgctgcgccttgcaggcgctgggcctggcgccgaccgccttgggc
gtgtaccgctacgcggatgttttcgacggcgatatcgagcgctgccccgacgcggcgggc
cgggtgcaggcgcgttcaggcgcggtgtaccacgcgcgcctgcgctggccgcgctcccgc
gcccgccaggcgccggccctgccggccttgccgcccgccgatgccgcgcgccccgccggg
ccgaatttcgacgccgagaccctgggcgcgctggcgcgcgccgtgcacctgtcggacgcg
ggcgtgtccatcctcctgcaaggcgaaaccggcgtgggcaaggaagtgttcgcgcggcaa
ctgcatgcgcgcggcaggcgggcggcggggccgttcgtggcggtgaactgcgcggcgctg
ccggaaagcctgatcgaatccgaattgttcggctacgaagacggcgcgttcaccggcgcg
cgccgccagggcagcaaaggcctgctgcggcaggcgcacggcggcgtgctgttcctggac
gaaatcggcgacatgccgctgatactgcaatcgcggctgctgcgcgtgctacagacgcgc
gaggtatcgccgctgggcgcggcgcggccggtgccggtggatttcgcgctggtatgcgcc
acgcaccgcccgctggcgcacgaagggcccgacgcgccggtgcggcccgacctgtatttc
cggatcgccgaatacaccgtgacgctggagccgctgcgcgcgcgcgcggaccgcctagaa
ctcctgcgcggcctgtgggcggcgcatggcgcggggccgctcctgccgccggacatcgaa
gccatcctgcttgcctacccgtggcccggcaactaccggcagatggtggcggtgctgcgc
acgctgcacgtgctggccgggccggcgggcagggtcgacgccgccatgctgcccgcggat
atccgcggcgcgcaagccggcccgccgcccgcggacaggggcgatccggcggatctcaag
gtaatggcggactcggcgatccgcgacgccctggccgcgcacggcggcaacgtcagccgc
gcggcgcgggccctgggcgtgcaccgcagcaccctgtaccggcgcgccgcggcgcttgcc
ccgccgcgcacgcggtaa
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