Achromobacter veterisilvae: WHX56_09950
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Entry
WHX56_09950 CDS
T10582
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
avh Achromobacter veterisilvae
Pathway
avh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WHX56_09950 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avh03019
]
WHX56_09950 (recQ)
03400 DNA repair and recombination proteins [BR:
avh03400
]
WHX56_09950 (recQ)
Enzymes [BR:
avh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WHX56_09950 (recQ)
Messenger RNA biogenesis [BR:
avh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WHX56_09950 (recQ)
DNA repair and recombination proteins [BR:
avh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WHX56_09950 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WXR75802
UniProt:
A0A446C686
LinkDB
All DBs
Position
complement(2153100..2154929)
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AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQEWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAD
TRREIAQRLSLDDARHFVSSFDRPNIRYRIIEKNEVRKQLLEMIRTEHEGESGVVYGLSR
ARVEETAEFLCNQGIDAMPYHAGLSPQVRAANQARFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGEESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLDPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTERTKQHGHETLSVFGVGEDLSDTAWRGVLRQLLAQGLL
TVDNEGFGTLALTEGSRAVLKGERQLMLRRESEKKTRSGKTGSGRPKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPESMDALSHISGVGARKLEAYGEEI
LQRVARPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtgttgcagcgcgtcttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaggtgatcgacggcggcgacgcgctggtcctcatg
cccaccggcggcggcaagtcgctctgttaccagatcccgtcgctggttcgcgaaggcacc
ggcatcgtcgtgtcgcccctgatcgcgctgatgcaggaccaggtcgacgccctgaccgaa
ctgggcgtgcgggcggccttcctgaattccacgcaggagtggcgggtggcccgcgacgtc
gaacaggccttcctggccggcgaactggacctgctctacgtggcccccgaacgcctgctg
accgaccgctgcctgcaattgctggaacgcggccgcatcgcgctgttcgccatcgacgaa
gcccactgcgtatcccagtggggccatgacttccggccggaatacctgggcctgtcgatg
ctgcacgagcgctggcccgacgtgccgcgcatcgcgctcacggcgaccgccaccgcggac
acccgccgcgaaatcgcccagcgcctgtcgctggacgacgcccgccacttcgtttccagc
ttcgaccgccccaacatccgctaccgcatcatcgaaaagaacgaggtgcgcaagcagttg
ctggaaatgatccgcaccgaacacgaaggcgaatccggcgtggtctacggcctgtcgcgg
gcccgcgtggaagaaaccgcggaattcctgtgcaaccagggcatcgacgccatgccgtac
catgccgggctcagcccccaggtgcgcgccgccaaccaggcgcgcttcctgcgcgaggac
ggcgtggtcatggtggccaccattgcgttcggcatgggcatcgacaagcccgacgtccgc
ttcgtggcccacatcgacctgcccaagtccgtggaaggctattaccaggagaccggccgc
gccggccgcgacggcctgcccgccaccgcctggctggcctatggcttgcaggacgtggtg
cagcagcgccgcatgatcgacgaatcacccggcgaggagtcctaccgcaggcggctcggc
cagcagctcgacgccatgctggggctgtgcgaaacggtggaatgccggcgcgtgcgcctg
ctggcctacttcggccagcagatcacggcctgcggcaactgcgacgtctgcctggatccc
ccgcaggcctgggacgggacggtcgcggcgcagaaggtgctgtccgccgtctaccgcctg
tggaaggaacgcggccagcgctacggcgcgggccacatcatcgacatcctgcgcggcaag
gtcaccgaacgcaccaagcagcacggccacgaaacgctcagcgtattcggcgtgggcgaa
gacctcagcgacaccgcctggcgcggcgtgctgcgccagttgctggcgcagggcctgctg
acggtggacaacgaaggcttcggcaccctggccctgaccgagggtagccgggccgtgctc
aagggcgagcggcaactgatgctgcgccgggaatcggaaaaaaagacgcgctcgggcaag
accggcagcggacgccccaaggcggccgccatcgacctgccggccgaactgcaacccgtc
ttcgaagcgctgcgcgcctggcgcggcgaagtcgccaagagccacggcgtgccggcctac
gtcatcttccacgacgccacgctgcgcgagatcgcgctggcccagccggagtccatggat
gcgctgagccacatcagcggcgtgggcgcccgcaagctggaagcctacggcgaggaaatc
ctacagcgcgtcgccagaccggttctgtag
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