Achromobacter veterisilvae: WHX56_10660
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Entry
WHX56_10660 CDS
T10582
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
avh Achromobacter veterisilvae
Pathway
avh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WHX56_10660 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avh03019
]
WHX56_10660 (pnp)
03016 Transfer RNA biogenesis [BR:
avh03016
]
WHX56_10660 (pnp)
Enzymes [BR:
avh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WHX56_10660 (pnp)
Messenger RNA biogenesis [BR:
avh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WHX56_10660 (pnp)
Transfer RNA biogenesis [BR:
avh03016
]
Prokaryotic type
tRNA degradation factors
WHX56_10660 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
OB_RRP5_4th
KH_SLS1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WXR75933
UniProt:
A0A446C904
LinkDB
All DBs
Position
2298985..2301147
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKVTKSFQYGQHTVVLETGEIARQASGAVVVSIEDTVVLATVVASKKAKPGQTFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEDFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYAINPTASQLKSSKLDLVVA
GTENAVLMVESEAQQLSEEIMLGGVVYGHEQMQAVINAIHELVKDAGKPDWDWQAPAKDE
ALIAAVTSAAQEGLNAAYQIREKQARTAKLREVSADVSAKLAAAAAEKGESAPDAVTVDN
IMFSLESAIVRGQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMMHYNMPPFATGETGRIGVPKRREIGHGRLAKRALIPLL
PAPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLILDGGKF
AVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMKEALDGSRGELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEAQAKEAQRRIVELTADVEVGQVYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIGGIEAQQPAAATEAAPQSEPQAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtgacaaaatcgttccagtacggccagcacacggtcgtcctggaaact
ggcgagatcgctcgccaggcctccggcgccgtggtggtgtcgatcgaggacaccgtcgtc
ctggccaccgtcgtggcttccaagaaggccaagccgggtcaaacgtttttcccgctgacc
gtcgactacatcgagaagacctacgctgccggccgtattccgggcgggttcttcaagcgc
gaaggcaagccgtccgaaaaggaaacgctgacctcgcgcctgatcgaccgtcccctgcgc
ccgctgttccccgaagacttctacaatgaagtccaggtggtcatccacacgctgtcggtc
aatcccgagatcgatcccgacatcgccgccatgatcggcgcctcggccgcgctggccatt
tcgggcatcccgttcaacggcccgatcggcgccgcgcgcgtgggctacatcgatggccag
tacgccatcaacccgaccgcctcgcaactgaagtcgtccaagctggacctggtcgtcgcc
ggcaccgaaaacgccgtgctgatggtggaatcggaagcgcagcaactgtccgaagaaatc
atgttgggcggcgtggtctacggccacgagcaaatgcaggccgtcatcaacgccattcac
gaactggtcaaggacgccggcaagcccgattgggactggcaagcgcccgccaaggacgaa
gccctgatcgccgccgtgacctcggccgcccaggaaggcctgaacgccgcctaccagatc
cgcgaaaagcaggcccgcaccgccaagctgcgtgaagtgtcggccgacgtgtcggccaag
ctggccgccgccgccgctgaaaagggcgagtccgccccggacgcggtgaccgtcgacaac
atcatgttctcgctggaatcggccatcgtccgcggccagatcctgaacggcgaaccgcgc
atcgacggccgcgacacccgcaccgtgcgccccatcagcgtgcgcctgggcgtgctgccc
cgcgcgcacggcagcgcgctgttcacccgtggtgaaacgcaagcgctggtcgtggccacg
ctgggcaccaagcaagacgaacagatcatcgacgcgctcatgggcgagtaccgcgaccgc
ttcatgatgcactacaacatgcctccgttcgccaccggcgaaacgggccgcatcggcgtg
ccgaagcgtcgcgaaatcggccacggccgcctggccaagcgcgcgctgatcccgctgctg
ccggcgcctgaagacttccagtacacgatccgcatcgtgtcggaaatcaccgagtccaac
ggctcgtcgtcgatggcttcggtctgcggcggctcgctggccatgatggacgccggcgtg
ccggtcaaggatcacgtggccggcgtggccatgggtctgatcctggacggcggcaagttc
gccgtgctgacggacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtc
gcgggcaccgaaaacggcgtcaccgcgctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggtggcgctggcccaggcccgcgaaggccgcctgcacatcctgggc
aagatgaaggaagcgctggacggttcgcgcggcgaactgtcggctttcgccccgcgcatg
ctgaccatcaagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacc
atccgcgcgctgaccgaagaaaccggcacgcagatcgacatctccgacgacggcacgatc
gtgatcgccagcgtcgacgaagcgcaggccaaggaagcccagcgccgcatcgtcgagctg
accgccgacgtcgaagtgggccaggtctacgaaggctcggtgctgcgcctgctggacttc
ggcgccatcgtgcaggtgctgccgggccgcgacggcctgctgcacatctcggaaatcgcc
aactaccgcatcgccaacatcaatgatgtgctgaaggtcggccagcaggtccgcgtcaag
gtcatcgaggccgacgacaagggccgcctgcgcctgtccatcaaggccatcggcggcatc
gaagcgcagcaacccgctgccgctaccgaagccgctccccaatcggaaccgcaagccgaa
taa
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