Achromobacter veterisilvae: WHX56_10770
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Entry
WHX56_10770 CDS
T10582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
avh Achromobacter veterisilvae
Pathway
avh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WHX56_10770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avh03021
]
WHX56_10770
Transcription machinery [BR:
avh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WHX56_10770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_24
HTH_28
HTH_11
GerE
DUF3489
Rv2175c_wHTH
HTH_17
HTH_3
TnsD
Motif
Other DBs
NCBI-ProteinID:
WXR75954
UniProt:
A0ABZ2S7W4
LinkDB
All DBs
Position
complement(2326099..2326605)
Genome browser
AA seq
168 aa
AA seq
DB search
MTALDPTAQQLAHALYRDHHGWLQGWLRKKLGCAFDAADLVHDTYARVLAHRELSGIHEP
RSYLATVAHGLMVNHLQRKDLERAYLETLARLPASAAPSPEARALALEALQEIDTLLDGL
PAAVRRAFLLCQLEGLTHAEIAARLHVSVGSVRQYIARALRQCLELAA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccctcgatccgaccgcgcagcaattggcgcacgcgctctatcgcgaccatcac
ggctggctgcagggatggctgcgcaagaagctgggctgcgccttcgacgcggccgacctg
gtgcacgatacctatgcgcgcgtgctggcgcaccgcgagctgtccggcatccacgagccg
cgctcctatctggccacggtggcgcacggcctgatggtgaatcacttgcagcgcaaggac
ctggaacgcgcctacctggaaacgctggcgcgcctgcccgcttccgcggcgccgtcgccc
gaggcgcgcgcgctggcgctggaagcgcttcaggaaatcgacacgctgctcgacgggctt
ccggcagccgtcaggcgggccttcctgctgtgccagctcgaaggcctcacccatgcggag
atcgccgcacgcctgcatgtgtcggtcggatcggtgcggcagtacatcgcccgcgccctg
cgccagtgcctggagcttgccgcgtga
DBGET
integrated database retrieval system
