Achromobacter veterisilvae: WHX56_11445
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Entry
WHX56_11445 CDS
T10582
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
avh Achromobacter veterisilvae
Pathway
avh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WHX56_11445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avh02000
]
WHX56_11445
Transporters [BR:
avh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
WHX56_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WXR76078
LinkDB
All DBs
Position
complement(2475674..2477239)
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AA seq
521 aa
AA seq
DB search
MKIHLLSAAVALALGGMSGTAWAQAAAPLRISLTADIRSTEPGVNRDSNSDAVVLHIVEG
LVAYGEDAEVRPLLAKSIDISPDGKTYTFKLREDVKFHNGAPLTSADVLWSWQHYTAEKS
GWRCASEFDGRGTVKVAAVEAPDAHTVVYRLEKPSALFLASLARTDCGGTGILHKDSVKA
DGSWDKPIGTGPFSLAEWKRGEYVRLTKFAGYANRGGARDGYTGSKRPLVDEVRFVIVPD
DSTAKAALERGDIDIIEDLSNSDVPVLQKTPNIKVAYAPVMSMTALLLQTKDPLLSNPKM
RQALAHAIDYAQLAGAVTEGLAQPNNSIVPLVSPYYDAAQKQGWSYDAALSQKLLQEAGY
KGQELVLMTTKRYPQSYNSAVILQAMLQAVGINARLSVVEWATQLDRYNAGTYQMMAFPY
SARLDAALNYEMVTGDKAKQPRKVWDSPEALKLIDAASVDTDHAKRQAAFDQLHKLFLAD
VPSIPLYNGLDIGAYRADVKGYQPWAVKKPRAWEVERVAGH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccacctattgagcgccgcggttgcgctggcgctgggcggcatgtccggcacg
gcatgggcacaggcagccgcgccgctgcgcatttcgctgacggccgacatccgttccacc
gagcccggcgtcaaccgggacagcaacagcgacgcggtcgtgctgcacatcgtcgaaggc
ctggtcgcctacggcgaggacgcggaggtccgcccgctgttggccaagtcgatcgacatc
agcccggacggcaagacctacaccttcaagctgcgcgaagacgtgaagttccataacggc
gcgccgctgacgtcggcggacgtgctgtggagctggcagcactacaccgcggaaaaatcg
ggctggcgctgcgccagcgagttcgacggccgcggcaccgtgaaggtcgcggccgtggaa
gcgccggacgcccacacggtcgtgtatcggctggaaaagcccagcgcgctgttcctggcg
tcgctggcccgcacggactgcggcggcacgggcatcctgcacaaggattcggtcaaggcc
gacggcagttgggacaagcccatcggcaccggccccttctcgctagcggaatggaagcgc
ggcgaatacgtgcgcctgacgaagttcgccggctacgccaaccgaggcggcgcgcgcgac
ggctatacgggatccaagcgtccgctggtggacgaagtgcggttcgtcatcgttcccgac
gactccacggccaaggccgcgctggagcgcggcgacatcgacatcatcgaggacctgtcc
aacagcgacgtgccggtgctgcaaaagacgccgaacatcaaggtggcgtacgcgcccgtg
atgagcatgacggcgctgctgctgcaaaccaaggacccgctgctgtccaatcccaagatg
cggcaggcgctggcccacgccatcgactacgcccaattggccggcgccgtgaccgaaggg
ctggcccagcccaacaattccatcgtgccgctggtgtcgccctactacgatgccgcgcag
aagcagggctggagctatgacgcggcgctgtcgcagaagctgctgcaggaagcgggctac
aagggccaggaactggtgctgatgacgaccaagcgctatccgcagtcgtacaactcggcc
gtgatcctgcaagccatgctgcaggccgtgggcatcaacgcgcgcctgtcggtggtggaa
tgggccacgcaactggaccgctacaacgccggcacctaccagatgatggccttcccctat
tccgcgcgcctggacgcggcgctgaattacgagatggtgacgggcgacaaggcgaagcag
ccgcgcaaggtctgggatagccccgaagcgctgaagctgatcgacgcggcgtcggtggac
acggaccacgcgaagcggcaggcggcgttcgatcagttgcacaagttgttcctggcggac
gtgccgagtattccgctgtacaacggcctggatatcggggcttatcgggccgatgtgaag
ggataccagccttgggcggtgaagaagccgcgggcatgggaagtggaaagggtcgcgggg
cattga
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