KEGG   Achromobacter veterisilvae: WHX56_13285
Entry
WHX56_13285       CDS       T10582                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
avh  Achromobacter veterisilvae
Pathway
avh03030  DNA replication
avh03410  Base excision repair
avh03420  Nucleotide excision repair
avh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:avh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WHX56_13285 (polA)
   03410 Base excision repair
    WHX56_13285 (polA)
   03420 Nucleotide excision repair
    WHX56_13285 (polA)
   03440 Homologous recombination
    WHX56_13285 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:avh03032]
    WHX56_13285 (polA)
   03400 DNA repair and recombination proteins [BR:avh03400]
    WHX56_13285 (polA)
Enzymes [BR:avh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WHX56_13285 (polA)
DNA replication proteins [BR:avh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WHX56_13285 (polA)
DNA repair and recombination proteins [BR:avh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     WHX56_13285 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WHX56_13285 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: WXR76425
UniProt: A0ABZ2S639
LinkDB
Position
2883300..2886017
AA seq 905 aa
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKAEYAACIFDA
RGKTFRDDIYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEADDVIGTLAKR
AAEHDVHTIVSTGDKDLAQLVNSHVTLVNTMSGEVLDEAGVASKFGVPPDRIVDYLMLVG
DTVDNVPGVTKVGPKTAAKWITEFGSIDKLVEGADGVKGVAGNNLRDAIPKFPLTRQLLT
VKCDCDLAGHVDSVDDLTPRPRDDAALTEIYEHYGFRTWLRELTGDAERVPAGDARIAHD
APAAPTELDYRIISDWAGFDAWMEKLEGASLVALDTETTSLDQMQARLVGLSLAVEPGVA
CYIPVAHRGPDGATQLPKAEVLARLKPWLEDATRAKLLHHAKYDAHVLANEGIKLAGIAE
DTMLQAYVLESHRGVGLNDLAQRYLGRSGVSYEDLCGKGAKQIGFDEVAVDKAGHYAAED
ADFTLQLHRVLRPMVAADEGLNRIYRLEIQVSAVLTTIERNGVKVDAAELGRQSHKLGQE
MLRLEQKAYELAGQPFNLNSPKQLGEILFDRMQLPVVRKTAGGAPSTDEDVLTKLAQDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPDTGRVHTRYSQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAEQGMLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATASEVFG
VPLADVSTEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAMYME
DTRRRAREQGYVETVFGRRLQLPEIRGASGPRRQGAERAAINAPMQGTAADLIKMAMVAV
QDWLEAENLQTRMIMQVHDELVLEAPDAELDLVKETLPRLMCNVATLRVPLVAEVGMGKN
WEQAH
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaaaaaaaccttattactggtcgacggttcaagttacttgtaccgcgctttccacgct
atgcctgatttgcgcaacgcgcaaggcgaacccacgggggcgctctatggcgtggtgaat
atgttgcgcaagctggtatctgaccataaggcagagtatgccgcatgtattttcgatgcc
cgcggcaagacgttccgcgacgacatctatccggagtacaagtcgcatcgcccgcccatg
ccggaagacctggcggcgcagatcgagcccatccaccgcgccgtgcgggcgctgggctgg
ccggtgctggccatcgaaggggtggaagccgacgacgtgatcggcaccctggccaagcgg
gccgccgaacacgacgtgcacaccatcgtgtccaccggcgacaaggacctggcgcaactg
gtcaacagccacgtcaccctggtcaacaccatgagcggcgaagtgctggacgaagccggc
gtggccagcaagttcggcgttccgcccgaccgcatcgtggattacctgatgctggtgggc
gacacggtggacaacgtcccgggcgtgaccaaggtgggcccgaagacggccgccaaatgg
atcacggaattcggctccatcgacaagctggtcgaaggcgcggacggggtcaagggcgtg
gcgggcaacaacctgcgcgacgccattccgaagtttccgcttacgcgccagttgctgacc
gtgaaatgcgactgcgacctggcgggccacgtcgacagcgtcgacgacctgacgccgcgc
ccgcgcgacgacgcggcgctgaccgaaatctatgaacactatggctttcgcacctggctg
cgcgagctgaccggcgacgccgagcgcgtgcccgcgggcgacgcccgcatcgcccacgac
gcgcccgccgcgcccacggaactggactaccggatcatttcggattgggccggattcgac
gcctggatggagaagctggaaggggcgtccctggtggcgctggacaccgagaccacgtcg
ctggaccagatgcaggccaggcttgtcggcctgtcgctggcggtggagccgggcgtggcc
tgctacatcccggtggcgcaccgcggcccggacggcgccacccagttgcccaaggccgag
gtgctggcgcggctgaagccgtggctggaagacgccacgcgcgccaagttgctgcatcac
gccaagtacgacgcccacgtgctcgccaacgaaggcatcaagctggcgggcattgccgaa
gacacgatgctgcaagcctatgtgctggaatcgcaccgcggcgtgggcctgaacgacctg
gcccagcgctatctgggccgcagcggcgtgtcctacgaggacttgtgcggcaagggcgcc
aagcagatcgggttcgatgaggtcgcggtcgacaaggccggccactatgccgccgaagac
gccgacttcaccttgcagttgcatcgggtgctgcgcccgatggtggcggccgacgaaggc
ctgaaccgcatctaccggctggaaatacaggtgtcggcggtgctcaccaccatcgagcgc
aacggcgtgaaggtcgatgccgccgaactgggccgccagagccacaagctgggccaggaa
atgctgcggctggagcagaaggcctatgagctggccgggcagcctttcaacctgaattcg
cccaagcaattgggcgagatcctgttcgaccgcatgcagttgccggtcgtgcgcaagacc
gccggcggcgcgccgtccaccgacgaagacgtgctgaccaagctggcgcaggactatccg
ctgccgcaggtgctgctggaataccgcggcctgtccaagctgaagtccacctatacggac
aagctgccgcgcatgatcaatccggacacggggcgcgtgcacacgcgctattcccaggcg
gccgtgatcaccggccgcctggcctcgtccgatcccaacctgcagaacatcccggtgcgc
accgaagccggccgccgcgtgcgcgaggcgttcatcgccgagcagggcatgctgctgtcc
gccgactactcgcagatcgaactgcgcatcatggcgcacgtgtccgacgacgccaacctg
caacgcgccttcgccgcgggcgaggacatccaccgcgccacggcgtcggaagtgttcggc
gtgccgctggcggacgtgtccacggagcagcgccgcgcggccaaggccatcaacttcggc
ctgatctacggcatgggggtgttcggcctggcgtccaacctgggcatcacgcgcgacgcc
gcgcaggcctatatcgaccgctacttcgcccgctatcccggcgtggcgatgtacatggaa
gacacccgccgccgggcgcgcgaacagggctatgtggaaaccgtcttcggacgccgcctg
caactgccggagatccgcggcgcctccggcccgcgccggcaaggggcggagcgggcggcc
atcaatgcgcccatgcagggcacggcggccgacctgatcaagatggccatggtcgcggtg
caggattggctggaagccgaaaacctccagacgcgcatgatcatgcaggtgcacgatgaa
ctggtgctggaagcgccggacgccgaactggatctggtcaaggaaacgctgccgcgcctg
atgtgcaatgtggcgaccttgcgcgttccgctcgtggccgaagtcggcatgggcaagaac
tgggagcaggcccactag

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