Achromobacter veterisilvae: WHX56_16725
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Entry
WHX56_16725 CDS
T10582
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
avh Achromobacter veterisilvae
Pathway
avh02024
Quorum sensing
Brite
Enzymes [BR:
avh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
WHX56_16725 (pdeR)
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Other DBs
NCBI-ProteinID:
WXR71304
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Position
3588211..3590208
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AA seq
665 aa
AA seq
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MTENQDERSILYAHFGTHSPYWRLAADSDAFELAAVKGAANIAMALRPEQAATIRGLTGI
TSSVRIDIALYGDLLRLHLVGRKINPNEWAGTASAHSDTESVAKDLVEGLSFAETVVSEA
NSVIVIVDQNGRVQRFNKLSEEYTGKREQDIVGRSVFDMFMTREEAIASRRNIAEFYKRG
QSYEAERVINTVKGPRLFLFRNKFVTSGSGEKRVYLICSGTDITEERQAQERLRVLANTD
MLTDLPNRHAITARLKEALAAGREGRGGVLFLDLDNFKRINDHYGHGFGDHLLKAVAVAI
SACLSEGQTLARLGGDEFIVLQEAAQPWELEATAQRIIERLREPFRQGLIEVYTSCSIGI
AMYPDHGADLDSVVRSADIAMYVAKEAGRHTYRVFQPEMDRRNADYVWLDTNLRKALSEG
HLMLYYQPKLAGRTGEVDGVEALVRWRSPERGMVGPGAFIPYAEESGLISPLGVWVMREA
ARQAAAWKRDGLNIRIAINMSARQLNDKGVVSDFMRAIGDTGLDPCLLDIELTESCLIED
EVAAIELIKQFRQLGARVHLDDFGTGYSSLSQLARIPLDAIKLDASFVRGVNENPVSQAL
ARAIVAVARTLELKVIAEGVETTEEAVFVDTLGVDAKQGYLYAKPMPAPEFTAWLTQRRR
LHLIA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaccaggacgaaagatcgatcctgtatgcgcatttcggtacgcatagcccg
tattggcgcctggcggctgacagcgacgcgttcgagctcgcagcggtcaagggcgccgcg
aacatcgccatggcgctgcggccggaacaggccgcgacgatacgcgggttgaccggcatc
acctccagcgtgcgcatcgacatcgcgctgtacggcgacctgctccggctccacctggtg
ggccgcaagatcaatcccaacgaatgggccggcaccgcgtccgcgcattccgataccgag
tccgtcgccaaggacctggtcgagggcctgtccttcgccgaaaccgtggtgtccgaggcc
aattcggtcatcgtcatcgtcgaccagaacggccgcgtgcagcgcttcaacaagctcagc
gaggaatacaccggcaagcgcgaacaggacatcgtcgggcgcagcgtcttcgacatgttc
atgacgcgcgaagaggccatcgcctcgcgccgcaatatcgccgagttctataagcgcggc
cagtcctacgaagccgagcgggtcatcaatacggtcaagggcccccggctgttcctgttc
cgcaacaagttcgtcaccagcggcagcggtgaaaagcgcgtctacctgatctgctcgggc
accgacatcacggaagagcgccaggcgcaggagcgcctgcgggtgctggccaataccgac
atgctgaccgacctgcccaaccgccatgccatcacggcgcggctgaaagaggcgctggcg
gcgggccgggaagggcggggcggcgtgctgttcctggacctggacaacttcaagcgcatc
aacgaccactacggccacggcttcggcgaccacctgctcaaggcggtggcggtggccatc
tccgcctgcctgtccgagggccagacgctggcgcggctgggcggcgacgagttcatcgtc
ctgcaggaagcggcccagccctgggaactcgaagccaccgcccagcgcatcatcgaacgc
ctgcgcgaacctttccgccaggggctgatcgaggtctacaccagttgctccatcggcatc
gcgatgtaccccgaccacggcgccgacctggacagcgtggtgcgcagcgccgacatcgcc
atgtacgtggccaaggaagcggggcgccacacttatcgcgtgttccagcccgaaatggac
cggcgcaacgcggactacgtctggctggataccaatctgcgcaaggccctgagcgaaggc
cacctgatgctgtactaccagcccaagctggcggggcgcaccggcgaggtcgacggcgtg
gaagccctggtgcgctggcgctcgcccgagcgcggcatggtcggcccgggcgccttcatc
ccctatgccgaggaatccggcctgatctcgccgctgggcgtatgggtcatgcgcgaagcc
gcccggcaggctgccgcctggaagcgcgacggcctgaatatccgaatcgccatcaacatg
tcggcccggcagttgaacgacaagggcgtggtcagcgatttcatgcgcgcgatcggcgac
accggcctggatccctgcctgctggacatcgaactcaccgaaagctgcctgatcgaagac
gaagtcgcggccatcgaactgatcaagcagttccggcaactgggcgcgcgcgtccacctg
gacgacttcggcaccggctattcctcgctgtcgcaactggcccgcattccgctggacgcg
atcaagctggacgccagtttcgtgcgcggcgtgaacgagaacccggtgtcgcaggcgctg
gcgcgcgccatcgtcgccgtggcgcgcacgctggaactgaaggtgatcgccgagggcgtg
gaaacgacggaagaggcggtgttcgtggatacgctgggcgtggacgccaagcaaggctat
ctctatgccaaacccatgccggcgccggagttcaccgcctggctgacccagcgccgccgg
ctgcatctgatcgcctga
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