Achromobacter veterisilvae: WHX56_16975
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Entry
WHX56_16975 CDS
T10582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
avh Achromobacter veterisilvae
Pathway
avh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WHX56_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avh03021
]
WHX56_16975
Transcription machinery [BR:
avh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WHX56_16975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_11
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WXR71350
UniProt:
A0ABZ2RU16
LinkDB
All DBs
Position
complement(3643500..3644027)
Genome browser
AA seq
175 aa
AA seq
DB search
MKPDGYGAAPSIDHIYCDHHEWLQGWLRRRLGNAADAADLAHDAFLRLLSKPAPQGFKSF
PEARGYLRAMANGLCADFWRRREVEQAWLDTLAARPESFEPSPEQRALIIETLMEIGTML
SRLPHKAATAFVMAQVDGVPYREIARTLAVSERMVQKYIAQGMLQCALIDAGLGK
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagacggatacggtgcggcaccgtccatcgaccacatctattgcgatcaccac
gaatggctccaagggtggctgcgacgccgcctgggcaacgcggcggacgctgccgacctg
gctcacgatgccttcctccgcttgctcagcaagccggccccgcaaggattcaagagcttt
ccggaagcacgcggctatttgcgcgccatggccaacggcctgtgcgcggacttctggcgc
cgccgcgaagtcgaacaagcctggctggacaccctggccgcgcgtcccgaatcgttcgag
ccgtctccggagcagcgggcgttgatcatcgaaacgctgatggaaatcggcacgatgctg
agccgcttgccgcacaaggccgccacggccttcgtcatggcacaggtggacggcgtgcct
taccgcgaaatcgcccggacgcttgccgtgtctgagcgcatggtgcaaaagtacattgcc
cagggcatgctgcaatgcgccctgatcgatgccgggctgggcaagtag
DBGET
integrated database retrieval system
