KEGG   Achromobacter veterisilvae: WHX56_23060
Entry
WHX56_23060       CDS       T10582                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
avh  Achromobacter veterisilvae
Pathway
avh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:avh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    WHX56_23060 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avh03400]
    WHX56_23060 (uvrB)
DNA repair and recombination proteins [BR:avh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WHX56_23060 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      WHX56_23060 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII DEAD UVR AAA_30 UB2H Kinesin AAA_22 DUF87 Microtub_bd
Other DBs
NCBI-ProteinID: WXR72504
UniProt: A0A446C868
LinkDB
Position
complement(4983913..4986009)
AA seq 698 aa
MSKSAIDPIAENPAPGGEGAPAIAAGPGFVDFPGSPFHLYQPYPPAGDQPAAIEGLIQGM
QDGLMFQTLLGVTGSGKTYTMANVIARLGRPALVLAPNKTLAAQLYAEMREFFPKNAVEY
FVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGI
GNPGDYHAMVLILRAGDQISRREILARLVAMQYTRNDADFTRGTFRVRGETIDIFPAESP
ELALRLALFDDEIESLELFDPLTGRIRQKLPRFTVYPGSHYVTPRDTVLRAIETIKEELR
ERVKRFTDDGHLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAAGEPPPTLIDY
LPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQ
CVFVSATPAAYEKEHADNVVEQVVRPTGLVDPLVEVLPARTQVDDLLGQIKARVTQGERV
LVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREG
LDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGHAILYADRITDSMQRAMEETS
RRRSKQLQFNVDHGITARGVQKAVRELIDGIVAPAQHDALEAAVPAEFLKDEKALAREIK
RLEKLMMDHARNLEFEQAAAARDALTALKQRVLLDGAV
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtctaaaagcgcaatagacccgattgcggaaaaccccgcgcccgggggcgagggcgcg
ccagccattgcggcgggccccggatttgtcgacttcccgggaagtccgtttcacctgtac
cagccctatccgccggcgggggaccagcccgccgccatcgagggcttgatccaggggatg
caggacggcctgatgttccagacgctcctgggcgtcacgggctcgggcaagacctacacc
atggccaacgtgatcgcccggctggggcggcccgcgctggtgctggcccccaataagacg
ctggccgcgcagctctacgccgagatgcgcgagttcttcccgaagaacgcggtcgagtac
ttcgtctcgtactacgactattaccagcccgaggcctacgtgccgacgcgcgacctgttc
atcgagaaggactcgtccatcaacgagcacatcgagcagatgcgcctgtcggccaccaag
agcctgctggagcgccgcgacaccatcatcgtgggcacggtgtcgtgcatctacggtatc
ggcaatccgggcgattatcacgcgatggtgctgatcctgcgcgccggggaccagatctcg
cgccgcgagatcctggcgcgcctggtcgccatgcagtacacccgcaacgacgccgacttc
acgcgcgggaccttccgcgtgcgcggcgagacgatcgacatcttcccggccgaaagcccg
gaactggcgctgcgcctggcgctgttcgacgacgagatcgaaagcctggagctgttcgat
cccctgaccggccgcatccgccagaagctgccgcgcttcacggtctacccgggttcccat
tacgtgacgccgcgcgacaccgtgctgcgcgccatcgagaccatcaaggaagaactgcgc
gaacgcgtcaagcgcttcacggacgacggccacctggtcgaggcccagcggctcgagcag
cgcacccgcttcgacctggaaatgctgcaggagctgggcttctgcaagggcatcgaaaac
tactcccgccacctgtcgggcgcggccgcgggcgaaccgccgcccaccctgatcgactac
ctgccggccgatgcgctgatgttcatcgacgaaagccacgtcaccatcggccaactgggc
ggcatgtaccgcggcgaccgctcgcgcaaggaaacgctggtgcagtacggcttccggctg
ccgtcggcgctggacaaccggccgctgcgcctcgaggaattcgaggcccgcatgcgccag
tgcgtgttcgtgtcggccacgccggccgcctacgagaaagagcacgccgacaacgtcgtc
gagcaggtcgtccggcccaccggcctggtggacccgctggtcgaagtgctgccggcccgc
acgcaggtggacgatctgctggggcagatcaaggcgcgcgtcacgcagggcgagcgcgtg
ctggtcaccacgctgaccaagcgcatggccgaggacctgacggacttcctgagcgagcac
ggcgtgcgggtgcgctacctgcactccgacatcgacaccgtcgaacgcgtggagatcatc
cgggacctgcgcctgggcacgttcgacgtgctggtggggatcaacctgctgcgagaaggc
ctggacatccccgaagtgtccctggtcgcgatcctggacgccgacaaggaaggcttcctg
cggtcggagcgcagcctgatccagaccatcgggcgcgcggcgcgcaacctgaacggccac
gccatcctctatgcggaccgcatcaccgattcgatgcagcgcgccatggaggaaaccagc
cgccgccgcagcaagcaactgcaattcaacgtcgaccacggcattacggcgcggggcgtg
cagaaggccgtgcgcgaactgatcgacgggattgtggcgcccgcccagcacgatgcgctg
gaggcggcggtgccggccgaattcctgaaggacgaaaaggccctggcgcgcgagatcaag
cgcctggaaaagctgatgatggaccacgcccgcaacctggaattcgaacaggccgcggcc
gcgcgcgatgccctgacggcgctgaaacagcgggtgctgctggacggcgccgtctag

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