Achromobacter veterisilvae: WHX56_25580
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Entry
WHX56_25580 CDS
T10582
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
avh Achromobacter veterisilvae
Pathway
avh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WHX56_25580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avh03400
]
WHX56_25580
Enzymes [BR:
avh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
WHX56_25580
DNA repair and recombination proteins [BR:
avh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WHX56_25580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WXR72979
LinkDB
All DBs
Position
complement(5515697..5516341)
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AA seq
214 aa
AA seq
DB search
MPTADLEIPKPEYWEAAVAHLMRRDRILKKIIPQHPEVWLTSRGTPFVTLARAIVGQQIS
SKAADAVWTKFIDAVGKRPTPVAVLRVGVDGLRAAGLSQRKAEYVLDLAVHFGERRVHPE
KWAAMDDEAVISELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPV
SRFEAREVSLAWQPWRTVATWYLWRSLEPTPVQY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgccgacctcgagattcccaagcctgagtattgggaagccgccgtagcccac
ctgatgcggcgcgaccgcatcctgaagaagatcatcccccagcacccggaggtctggctg
acttcgcgcggcacgcctttcgtgacgctggcgcgggcgatcgtcgggcaacagatctct
tccaaggcggccgacgccgtctggaccaagttcatcgacgccgtgggcaagcgccccacg
cccgtcgccgtgctgcgcgtcggcgtcgacggcctgcgcgcggcgggcctgtcccagcgc
aaggccgaatacgtgctggatcttgccgtgcatttcggcgaacggcgggtccaccccgag
aagtgggcggcgatggacgacgaagccgtcatttccgagctggtcgccatccggggcatc
gggcgctggacggcggagatgtttttgattttcaatctgcagcggcctgacgttctgccg
ctggatgatcttgggttgctcaaggcaatctcgctacactatttcagcggcgagcctgtc
tctcgcttcgaggcccgcgaggtctcgctggcgtggcaaccctggcgtaccgtggcgacc
tggtatctgtggcgcagtctggaaccgactccggtccagtactga
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