KEGG   Achromobacter veterisilvae: WHX56_26935
Entry
WHX56_26935       CDS       T10582                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
avh  Achromobacter veterisilvae
Pathway
avh03030  DNA replication
avh03430  Mismatch repair
avh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:avh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WHX56_26935
   03430 Mismatch repair
    WHX56_26935
   03440 Homologous recombination
    WHX56_26935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:avh03032]
    WHX56_26935
   03400 DNA repair and recombination proteins [BR:avh03400]
    WHX56_26935
Enzymes [BR:avh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WHX56_26935
DNA replication proteins [BR:avh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     WHX56_26935
DNA repair and recombination proteins [BR:avh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     WHX56_26935
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: WXR76988
UniProt: A0ABZ2S9G5
LinkDB
Position
complement(5787729..5788265)
AA seq 178 aa
MAEALRALRGPFIVADLETTGLSTATCEILEFAAVRVDASGAHEREYTQVVRTRGPVPSF
ITRLTGITQAEVDRHGVPVVQAFSSFLDFVEDLPVFFHNASFDRRFLGAAADQTGLPFSN
ATHCTLALARRAWPELPSHKLEILARHVGASDPTHRALADVRTTVAVALAASARLAAA
NT seq 537 nt   +upstreamnt  +downstreamnt
ctggccgaggcgctgcgggccttgcgcggcccattcatcgtggccgacctggaaaccacc
ggcctgtccacggccacctgcgagatcctggagttcgccgccgtccgcgtggacgcgtcg
ggcgcgcacgagcgggaatacacgcaggtggtgcgcacgcgcggcccggtcccgtctttc
attacccggttgaccggcatcacgcaggcggaagtcgaccgccacggcgtgcccgtggtg
caggcgttttcgtccttcctggatttcgtggaggacctgcccgtgtttttccacaatgcc
tctttcgaccggcgcttcctgggggccgccgcggaccagaccggcctgccgttttcgaac
gccacccattgcacgctggcgctggcgcggcgcgcctggcccgaactgccttcgcacaag
ctggagatcctggctcgccacgtcggcgcctcggatcccacccaccgggcgctggccgac
gtgcgcaccacggtcgccgtcgcgctggcggccagcgcgcggctggcggcggcctga

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