Achromobacter veterisilvae: WHX56_27130
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Entry
WHX56_27130 CDS
T10582
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
avh Achromobacter veterisilvae
Brite
KEGG Orthology (KO) [BR:
avh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avh03000
]
WHX56_27130 (prpR)
Transcription factors [BR:
avh03000
]
Prokaryotic type
Helix-turn-helix
Other families
WHX56_27130 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS
PAS_8
PAS_4
PAS_7
Mg_chelatase
PAS_9
AAA_16
HTH_Tnp_ISL3
HTH_psq
Xre-like-HTH
AAA
HTH_17
AAA_2
PAS_10
AAA_7
AAA_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WXR73265
LinkDB
All DBs
Position
complement(5828854..5830803)
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AA seq
649 aa
AA seq
DB search
MLPASPSTEPDSASLPRIWAIGMARISRSFAQILPRFAGRGEFKLIEAGFEAAANAINQA
ARQGQVDAVVAAGLNGAYLRRHVSVPVVQVKIIGFEVMNALSTARRISPRVALLGQAGQY
PELDTFLSTFSLDIPVRTYQDPDDALAQVQALKGEGIEVIVGSGLLVDYAERIGLTGVLV
YSPATIGACIEDAIEITRLQRIESGRREYLNAVLSNLDEGVAAVDASGRVQALNPAVERL
LGISASGMAGRRLEEISPALSLDEVLRSGKREAESIHRLAGKMVVVNRIPLATGAGLSGA
VLTLQEAGAIHRADRNLRTRARMRAHAVRYTLDDLFGTAPPVEKVRMLGRRYARVDSTVL
IGGESGTGKEVLAQGIHQASARHSFPFIAVNCAAFPESLLESELFGYEDGAFSGARRGGK
PGLFESAHNGTLFLDEVGDMPAALQIRLLRVLQERQVMPVGGSEAVPVNVRIIAATHRDL
AVMVAAGDFRQDLFFRLNILRIDMPTLRERRQDIWPLAQLLYLRIQENLGLYPHRPLSPA
AQAALMAYAWPGNIRELENVLERLAVYLVEMPADLTDAQMRRVVGDVAPELAGGATADGD
AESLADTSRRHDAAHIRTVLARCGGNRQEACAILGISATTLWRRLRETR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgcctcgccatcgaccgaaccggattccgcctcgttgcctcgcatctgggcc
ataggcatggcgcggatatcgcgcagctttgcgcagatactgccgcgcttcgccggacgg
ggagagttcaagctcatcgaggcgggcttcgaggcggccgccaacgccatcaaccaggcg
gcccggcaggggcaggtggatgcggtcgtggcggcgggcctcaatggcgcctatctgcgg
cgccatgtgtccgtgcccgtggtgcaggtgaagatcatcggcttcgaggtcatgaacgcg
ctctccacggcccgccgcatttcgccgcgggtggcgttgctggggcaggcgggccagtat
ccggagctggacacattcctgagtacgttctccctggatatcccggtccgcacctaccag
gatccggacgacgcgctggcgcaggtccaggcgctgaagggcgagggcatcgaggtgatc
gtcggctccggcctgctcgtggattacgccgagcgcatcggcctgacgggcgtgctggtg
tattcgccggcgacgatcggggcgtgcatcgaagacgccatcgaaatcacccggctgcag
cggatcgaatcggggcggcgcgaatacctcaacgcggtgctgtccaatctggacgaaggc
gtggccgccgtcgacgcgtcgggcagggtccaggccctgaaccccgcggtcgagcgcctg
ctgggcatcagcgcgtccggcatggcggggcggcggctggaggagatttcgccggcgctg
tcgttggacgaggtgctgcgcagcggcaagcgcgaggccgaatccatccatcgcctggcc
ggcaagatggtggtcgtgaaccgcattcccctggcgaccggggctggactgtcgggcgcc
gttctgaccttgcaggaagccggcgccatccaccgcgccgaccgcaacctgcgcactcgc
gcccggatgcgcgcccacgcggtgcgctacacgctggacgatctgttcggcacggcgccg
cccgtcgagaaagtgcgcatgctgggccggcgctacgccagggtggattccactgtgctg
atcggcggcgaaagcggcacgggcaaggaagtgctggcgcaaggcatccatcaggccagc
gcgcgccacagtttccccttcatcgccgtcaactgcgcggctttccccgagagcctgctg
gagagcgagttgttcggctacgaagatggcgccttcagcggagcccgccggggcggaaag
cccggcctgttcgaatcggcccataacggcaccctcttcctggacgaggtgggcgacatg
ccggccgcgttgcagatccgcctgctgcgggtgctgcaggaacgccaggtgatgccggtg
ggcggcagcgaagccgtgccggtcaacgtgcgcatcatcgccgccacccaccgggacctg
gcggtcatggtggccgcgggggacttccgccaggacctgtttttccggttgaatattctg
cgcatcgacatgccgaccttgcgcgaacgcaggcaggacatctggccgctggcgcaactg
ctttacctgcgcattcaggagaacctcggcctgtacccgcaccggccgctgtctcccgcc
gcgcaggccgccttgatggcgtatgcctggcccggcaatatccgcgaactcgaaaacgtg
ctggagcgcctggccgtatatctggtcgagatgcccgcggatctcacggacgcgcaaatg
cggcgcgtcgtcggcgacgtcgcgcccgaactggctggcggcgcgacggcggatggggat
gcggagtcgctggccgacacctcgcggcggcatgacgcggcgcatatccggacggtgctg
gcgcgctgcgggggcaatcgccaggaggcctgcgctattcttggaatcagcgccactacg
ctttggcgccggctgcgcgaaactcgatag
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