Achromobacter veterisilvae: WHX56_28645
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Entry
WHX56_28645 CDS
T10582
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
avh Achromobacter veterisilvae
Pathway
avh03410
Base excision repair
Brite
Enzymes [BR:
avh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
WHX56_28645
Transcription factors [BR:
avh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
WHX56_28645
DNA repair and recombination proteins [BR:
avh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WHX56_28645
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WXR73545
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Position
6149451..6150896
Genome browser
AA seq
481 aa
AA seq
DB search
MDLNHDACYSAIQVRDARYDGRFFTAVKTTGIYCRPVCPARTPLSKNVTFYATAAAAQEA
GYHPCLRCRPETAPELGPGHELPDSVSRALQLIELGALDEEGMDALARRLGVGERQLRRQ
FRQHLGASPVAVAQTRRVLLAKQLIHETRLPMAEVAFASGFGSIRRFNEIFHRLFGRAPG
ELRRSEKPEVPAGREGEIELLLRYRPPYDWEAMLGFLRLRAIPGVERVTDDAYARTLCLD
GHQGTVTLRPGPGNALRAVVRFPRLQALPAIIARLRRVFDLASDPVAIAAQFSRDPVMTA
LIQARPGLRVPGAWDGSELSMRAVLGQQITVAAAVRLAGRLVAAHGEPMARPDGELTHVF
PRPEAVAAAELASLGMPRSRAATLSAVAAAAVADRHLFDAGNGLAESVQRLRAIRGVGEW
TAQYIALRQLREPDAFPSADIGLIRALERLESRAYTPAQLLARAEAWRPWRAYAAQHLWT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaccacgacgcctgctacagcgcgatccaagtgcgcgacgcccgctacgac
ggccgcttcttcaccgccgtcaagaccacgggcatctattgccgcccggtctgcccggcg
cgcacgccgctctcgaagaacgtcacgttctatgcgaccgcggcggcggcgcaggaggcg
ggctaccacccctgcctgcgctgccggcccgagacggcgcccgagctggggccggggcac
gaactgcccgacagcgtgtcgcgggcgctgcaattgatcgagctgggcgcgctggacgag
gaaggcatggacgcgctggcccggcgcctgggcgtgggcgaacgccagcttcggcgccag
ttccgccagcacctgggcgcctcgcccgtggccgtcgcccagacgcggcgcgtgctgctg
gccaaacagctaatccacgaaacccgcctgccgatggccgaggtcgccttcgcgtcgggc
ttcggcagcatccgccgcttcaacgagatattccatcgcctgttcgggcgggcgccgggc
gaactccgccgctccgaaaagcccgaagtcccggccggccgcgaaggcgagatcgaactg
ctgctgcgctatcggccgccctacgactgggaggccatgctgggcttcctgcgcctgcgc
gccattcccggcgtcgagcgggtcacggacgacgcctacgcgcgcaccctctgcctcgat
gggcaccagggcacggtgacgctgcggcccggcccgggcaatgcgctgcgggccgtcgtg
cgcttccccaggctgcaggcgctgcccgccatcatcgcccgcctgcgccgcgtcttcgac
ctggccagcgatcccgtcgccatcgccgcgcagttctcgcgggacccggtcatgacggcg
ctgatccaggcccgtcccgggctgcgcgtgcccggcgcctgggacggatccgagctgtcc
atgcgcgccgtgctgggccagcagatcacggtcgccgcggccgtccgcctggccggcagg
ctggtcgccgcgcatggcgagccgatggcccggcccgacggggaactgacccacgtgttc
ccccggcccgaggcggtcgcggccgccgagctggcgtccctgggcatgccccgcagccgc
gcggcgacgctgtccgccgtggccgccgcggcggtggcggacaggcacttgttcgacgcc
ggcaacgggctggcggaatccgtccagcgcctgcgcgccatccgcggcgtgggggaatgg
acggcgcagtacatcgcgctgcgccaactgcgcgaacccgacgccttcccgtccgccgac
atcggcctgatccgcgcgctggaacgcctggaatcgcgcgcctacacgcccgcgcagttg
ctggcccgggccgaggcctggcgcccgtggcgcgcctacgcggcgcagcacctgtggacg
gcttga
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