Allorhizobium ampelinum: Avi_0006
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Entry
Avi_0006 CDS
T00851
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03030
DNA replication
avi03430
Mismatch repair
avi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avi_0006 (dnaQ)
03430 Mismatch repair
Avi_0006 (dnaQ)
03440 Homologous recombination
Avi_0006 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_0006 (dnaQ)
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_0006 (dnaQ)
Enzymes [BR:
avi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avi_0006 (dnaQ)
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Avi_0006 (dnaQ)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Avi_0006 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACM34973
UniProt:
B9JXU3
LinkDB
All DBs
Position
1:3187..3897
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AA seq
236 aa
AA seq
DB search
MREIVFDTETTGLESKLDRVIEIGGIELFNHFPTGRSFHVYINPADRAIHPDALAVHGIT
PEFLKDKPVFADIVEDLVAFFDGAKWVAHNATFDMGFINAEFERLGRPLVGPEHVIDTLS
LARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMLGGRQATFGLEQSG
NSDKRSRTQDSNVTVEIAARPKTLASRLTEAEQERHAALVKRLGQKAIWAHYNQGE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaatcgttttcgatacggaaaccaccggactggaaagcaagctggaccgggtg
attgaaatcggtggcatcgaattgttcaatcatttcccgaccggtcgcagttttcacgtc
tatatcaatcctgccgaccgggccattcacccggatgccttggcggttcacggcattaca
cctgagtttttgaaggacaagccggtcttcgccgatatcgtcgaggatctggtcgctttt
ttcgatggcgcaaaatgggtggcgcataatgccacattcgacatgggatttatcaatgcc
gagtttgagcggttgggtcgtccgctggtcgggccggagcatgtcatcgataccctgtct
ctggcgcggcgcaaacacccgatgggtccaaactcgctcgatgcactttgccgacgctat
ggtatcgacaattctcatcgcaccaagcatggcgccttgctcgattccgaacttctggct
gaagtctatatcgaaatgctgggcggccgccaggcgaccttcggtcttgagcagtctgga
aacagcgacaagcgatcccgcactcaggatagcaatgtgacggtggagattgccgcccgt
ccgaaaacactggcgtcgcgtctaaccgaggccgaacaggagcgccatgcagccctggtc
aagcggctcggccagaaagcgatctgggcgcattacaatcaaggcgaataa
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