Allorhizobium ampelinum: Avi_0013
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Entry
Avi_0013 CDS
T00851
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_0013 (gyrB)
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_0013 (gyrB)
Enzymes [BR:
avi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Avi_0013 (gyrB)
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Topoisomerases
Avi_0013 (gyrB)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Avi_0013 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACM34980
UniProt:
B9JXV0
LinkDB
All DBs
Position
1:8119..10554
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AA seq
811 aa
AA seq
DB search
MTETTDEANAASTAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNADGSVTVTDNGRGIPTDIHTGEGISAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVKLSMKIRRHGKVHEMSFTHGVADAPLAVTGDYQGRSGTEITF
LPSTETFTQVEFDYGTLEHRLRELAFLNSGVRILLTDKRKSDIRQEEMLYDGGLEAFVRY
LDRSKKPLVSNPVAIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGA
LTRQITSYADSSGITKKEKVTLQGEDCREGLSAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWFEEHPTEAKILVGKVVEAAVAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSELFLVEGDSAGGSAKQGRSRERQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVTRGKSIQYLKDEKALEEYLIGMGLDDASLKLGSGEVRAGQDLREVVQDALR
LRSLIDGLHSRYNRNVVEQAAVVGALNHELTANRERAEQTAAEVAKRLDLIAEETERGWE
GFVTEEGGLRFERMVRGVKEVAALDVALIGSADARHIDQLATRLNDIYGQPPVLTRKDGQ
QTISGPRNLLDAVFSFGRKGLSMQRYKGLGEMNAEQLWETTLDPNVRSLLQVRVNDATDA
DSLFSRLMGDEVEPRRDFIQENALNVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacaaccgatgaagcaaatgccgccagcactgcctatggtgctgactccatc
aaggtgctgaaaggcctcgatgctgtccgcaaacgtcccggcatgtatatcggtgatacg
gatgatgggtccggcctgcatcatatggtctatgaagtcgtcgataacgctattgacgag
gcgcttgccggtcatgccgatatcgtcacggtaacgctgaacgcggatggatcagtgacc
gtgaccgacaatggacgcggtattcccaccgacatccatacgggcgaaggcatttcggct
gccgaagtcatcatgactcagcttcatgccggcggtaagttcgaccagaattcctacaag
gtctctggcggtctgcacggggttggcgtttcggttgtcaatgcgctgtccgtcaagctt
tccatgaagatccgccgtcatggcaaggttcatgaaatgagcttcacccacggcgttgcc
gatgcaccgttggccgtgacgggcgattatcaaggccgctctggtactgaaatcaccttt
ctgcccagcacggaaaccttcacccaggtcgagttcgattatggaacgctggagcatcgc
cttcgcgagctcgccttccttaattccggtgtccgcattctgctgaccgacaaacgcaag
tccgatatccgccaggaagaaatgctgtatgatggcggcctagaagccttcgtgcgctat
ctcgaccgctcgaaaaagccgctggtcagtaatccagtcgccattcgcggcgagaaggat
ggcattaccgtcgaagtcgcgatgtggtggaacgacagctatcatgaaaatgtactgtgc
ttcaccaacaacattcctcagcgcgatggcggcacgcatatggccgggttccgcggcgcg
ctgacccgccagattacctcctatgccgacagttccggcataaccaagaaggaaaaggtc
acccttcagggtgaagactgccgtgaaggcctgtcggctgttctgtccgtcaaagtaccc
gatccgaaattctcgtcgcagaccaaggacaagctggtttcgtcggaagtgcggcctgtg
gtcgaaagcctggtcaacgaagcgctcagcacttggttcgaggaacatccgaccgaggcg
aagattctggtgggcaaggtggtggaagctgccgttgcccgcgaagccgcccgcaaagcc
cgcgaactgacccgccgcaaaggcgcactggatattgcctcgctgcccggcaagctcgcc
gactgctctgagcgtgatccggccaaatccgaactcttcctcgtcgaaggtgactcggct
ggtggttccgccaagcaaggccgctcgcgtgagcgccaggcgatcctgccattgcgcggt
aagatccttaatgtggaacgcgcccgcttcgacaagatgttgtccagccaggaaatcggc
acgctgattaccgcgctcggcacgtcgatcggcaaggacgagttcaatgccgacaagttg
cgctatcacaagatcatcatcatgaccgatgctgacgtcgacggcgctcatattcgcaca
ttgcttctgaccttcttcttccgccagatgccggaactgatcgagcgcggccatctctat
atcgcccagccgccgctctataaggttacacgcggcaaatccattcagtatctgaaggat
gaaaaggcgctggaagaatatctgatcggcatgggcctggacgatgcttcgctgaagctc
ggcagcggcgaagtgcgcgctggacaggatctgcgcgaagtggtgcaggacgcgctgcgc
cttcgcagcctgatcgatggattgcattcgcgctacaatcgcaatgtcgtggaacaggcc
gccgtcgtcggtgcattgaatcacgaactgaccgccaaccgggaacgggccgagcagacg
gcggcggaagtcgccaagcgtctcgacctgatcgccgaggaaaccgaacggggctgggaa
ggcttcgtgacggaagagggcggcttgcgcttcgagcgcatggtgcgtggtgtcaaggaa
gtggcggcgctggatgtggcactgatcggttcagccgatgcacgccacattgaccagctc
gccacccgcttgaacgatatctatggccaaccgccggtactgacccgcaaggatggccag
cagaccatttccggtccgcgtaacctgctggatgcggtgttctccttcggtcgcaagggc
ctgtccatgcagcgctataaaggtcttggcgagatgaatgccgagcagctgtgggaaacc
acgctcgatccgaatgtacgctcgctgttgcaggttcgggtcaatgacgccaccgatgcc
gatagcctgttctcccgccttatgggcgatgaggtggaaccgcgtcgcgatttcatccag
gaaaacgccctgaatgtcgccaatctggacatttga
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