Allorhizobium ampelinum: Avi_0120
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Entry
Avi_0120 CDS
T00851
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avi03016
]
Avi_0120 (rnd)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Avi_0120 (rnd)
Transfer RNA biogenesis [BR:
avi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Avi_0120 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACM35067
UniProt:
B9JYH1
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All DBs
Position
1:complement(112465..113091)
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AA seq
208 aa
AA seq
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MASTIRYHEGDISSEDAARYTRAIAIDTETLGLIPRRDRLCVVQLSPGDGTADVIRIAPG
QRQAPNLTALLEDPTREKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLSRTYTDRHGL
KDNLKEMLDVDVSKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTARLVRDGRMDH
ATACFEFLPTRAKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaccattcgctaccatgaaggtgatatcagcagcgaagacgcggcgcgctat
acccgcgccatcgccatcgacaccgaaacgctggggcttatcccccgccgcgaccggctc
tgcgtggtgcagctttcgccgggtgacggcacagccgacgtcattcgcattgcgccgggc
cagcgccaggcgcccaacctgaccgccctgctggaagacccgacccgggaaaaaatcttc
cattatggccggttcgacatcgccgtgctgttccatacgtttggtgtcaccaccacgccg
gtgttctgcacgaagatcgcctcgcgtctgtcgcgcacctataccgaccggcatggacta
aaggacaacctcaaggaaatgctggatgtggatgtgtccaaggcccagcaatcctccgac
tgggcggcagaaacgctgtctccggcgcagctcgaatatgccgcctccgacgtgctctat
ctgcatgcgctgcgcgacaagctaaccgcccggctggtgcgcgatggccgcatggaccac
gccaccgcctgcttcgagttcctgccgacccgggccaaactggacctgctgggctgggaa
gagaccgatattttcgcccatagctga
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