Allorhizobium ampelinum: Avi_0178
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Entry
Avi_0178 CDS
T00851
Symbol
rsmC
Name
(GenBank) ribosomal RNA small subunit methyltransferase
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avi03009
]
Avi_0178 (rsmC)
Enzymes [BR:
avi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
Avi_0178 (rsmC)
Ribosome biogenesis [BR:
avi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Avi_0178 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_PK
UPF0020
MTS_N
Eco57I
Cons_hypoth95
DUF4350
Methyltransf_32
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ACM35107
UniProt:
B9JYL1
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All DBs
Position
1:165091..166107
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AA seq
338 aa
AA seq
DB search
MSRETLKTIFHPFVTEAVALPGEDERFLFLGAEAGFVKPEGFGAELTVVQSFRPDFRRLE
AARQTPVAVVTGEDYNGALVLAGKHKGLNENRVAEALARVRAGGVIIVAGAKEDGIQPLR
KQIDRLGLEPQSLPKYHGIAVWFTVPEDKAAAIAALASKPVMVEGRFETYAGQFSHMHAD
PGSELLVSRLPDDFDGNAADFGAGWGYLSVMLAEKARRTNRIDLFEANYDALEQAKKNLA
RNCPHLTARFFWQDLGTESPKEKYDLVIMNPPFHEGHATEPSIGEAMIKAAADALRGGGD
LLMVANRGLAYEPVLAANFRQHGETCRNARYKVLWAKK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgaaacactgaagaccatttttcatccctttgtcaccgaagctgtagctctt
ccaggcgaagacgaacgcttcctgtttctcggtgctgaggccggtttcgtgaagccggaa
ggctttggtgccgaattgacggtggtccaaagtttccgccccgattttcgccgcctggag
gcagcccgtcaaacgccggttgctgttgtgacaggtgaggattataacggcgcgctggtt
ttggctggcaagcacaagggtctcaacgaaaaccgtgttgccgaagcgctggcgcgtgtc
cgggccggtggcgttatcattgtggccggtgccaaagaagacgggattcagccgctgcgc
aagcagatcgatcgccttggccttgagccgcaatcgctgccaaaatatcacggcattgcc
gtgtggttcaccgtgccggaggataaggctgcggcgattgccgcgctcgcttccaagccg
gtcatggtcgagggccggtttgaaacctatgccgggcagttttctcatatgcatgccgat
cccggttctgaactgctggtcagccggttgccggacgatttcgatggcaatgccgccgat
ttcggcgctggttggggctatctgtcggtgatgctggccgagaaggcacggcgcaccaac
cgcatcgacctattcgaggccaattacgacgcgctggaacaggccaagaaaaacctggcc
cgtaactgccctcatctgacggcacggttcttctggcaggatctgggtactgaatcgccc
aaggaaaaatacgatttggtcatcatgaatcctcctttccatgagggtcatgcgacggag
ccatcgattggcgaggcaatgatcaaagcggcggcggatgctttgcgcggtggcggagat
ctgctgatggtggccaatcgtggtcttgcctatgagccagttctggccgccaattttcgt
cagcatggcgagacctgccgcaatgcacgctacaaggtgctgtgggcgaagaaataa
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