Allorhizobium ampelinum: Avi_0299
Help
Entry
Avi_0299 CDS
T00851
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03030
DNA replication
avi03410
Base excision repair
avi03420
Nucleotide excision repair
avi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avi_0299 (polA)
03410 Base excision repair
Avi_0299 (polA)
03420 Nucleotide excision repair
Avi_0299 (polA)
03440 Homologous recombination
Avi_0299 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_0299 (polA)
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_0299 (polA)
Enzymes [BR:
avi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avi_0299 (polA)
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Avi_0299 (polA)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Avi_0299 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Avi_0299 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ACM35193
UniProt:
B9JYU7
LinkDB
All DBs
Position
1:complement(252729..255707)
Genome browser
AA seq
992 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPALTRKSDGLPVGAVSGFCNMMWKLLTEARDTSVGVT
PTHLAVIFDYSSKTFRKDLYPEYKANRSAPPEDLVPQFGLIRQATRAFNLPCIETEGFEA
DDIIATYARAAEAIGADVTIVSSDKDLMQLVTANVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQSLTGDSTDNIPGIPGIGPKTAAQLLEEYGDLDTLMARASEIKQNKRRENILAGA
ELVKLSRQLVTLRTDVPLDMPLDALMLEKQDGPKLVAFLKAMEFTSLTRRVADNCDCDAG
AIEPATISVEWGASARGPDLDAGAAAQTPASGQEAGPTAQSAKAEGATPADLAAARQSAF
GGQPIDRSAYVTIRDLPTLEGWIAAAREAGFVAFDTETTSLDPMQADLVGVSLALQDNAA
SPGAATIRAAYVPLGHKTGRDDLFSDGLKLAENQIPMDAALTALKGLLEDASVLKVAQNL
KYDYLVMKRHGIVIRGFDDTMLLSYVLEAGVGAHGMDSLSERWLGHTPIPYKEVAGSGKS
LVTFDLVDIDKATAYAAEDADVTLRLWLVLKPRLAAVGLARVYERLERPLVPVLADMEER
GITIDRQILSRLSGELAQKAAAFEDEIYELAGERFNVGSPKQLGDILFGRMNLPGGSKTK
TGQWSTSAQVLEDLAAQGEPLPRKIVDWRQLTKLKSTYTDALPGYVHPQTKRVHTSYSMA
ATTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVLAHVADIPQ
LRQAFADGVDIHAMTASEMFGVPVDGMPSEVRRRAKAINFGIIYGISAFGLANQLSIERA
EAGEYIKKYFERFPGIKDYMESTKAFVREHGYVETIFGRRAHYPEIKSSNPSMRAFNERA
AINAPIQGSAADVIRRAMVQVEPALAKAGLGEKTRMLLQVHDELIFEVEDEAIEAALPVI
VSTMENAAMPAIAMRVPLKVDARAADNWDEAH
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctctttcttgtcgacggctccggcttcatcttccgggccttc
catgcgcttccggcgctgacccgcaaatcggacgggctgccggtcggcgcggtctcgggc
ttttgcaatatgatgtggaagctgctgaccgaagcacgcgacacgtcagtcggcgtcaca
cccacccaccttgctgtgattttcgactattcgtcaaaaaccttccgcaaggatctctat
cccgaatacaaggccaatcgctccgccccgccggaagatctcgtgccacaattcggactg
atccgccaggcgacgcgggccttcaacctgccctgcatcgaaaccgaaggcttcgaggcc
gatgacattatcgccacctatgcgcgggccgccgaagccatcggagcggatgtcacaatc
gtctcttccgacaaggacctgatgcagttggtgactgccaatgtccatatgtatgacagc
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggtgtgccgccggaa
aagatgatcgacctgcaatcgctgaccggcgacagcaccgataatattcccggcattccc
ggcatcggcccgaagacggcggcgcaattgctggaggaatatggcgatctggacacgctg
atggctcgggcctccgaaatcaagcagaacaagcggcgcgaaaacattctggcaggtgcc
gaactggtcaagctgtcgcggcaattggtaacgctgcgcaccgacgtgccgctggacatg
ccgctggatgcgctgatgctggaaaagcaggatggaccaaagctggtcgccttcctgaag
gccatggaattcacctcgctgacacggcgcgtcgccgacaattgcgattgtgatgctggc
gccatcgagcccgccacgatctcggtggaatggggtgcctcggcccgtggcccggatctc
gatgccggtgccgcagctcaaacgcccgcctccggccaagaagccggacccacggcacaa
tccgccaaggccgagggcgcgacgcctgccgatcttgccgcggcccggcaatcggccttt
ggtggccagcccatcgaccgatccgcctacgtgaccattcgcgatcttcccaccctggaa
ggctggattgccgcggcgcgggaggccggttttgtcgccttcgatacggaaaccacctcg
cttgacccgatgcaggctgatctggtcggtgtgtcgctggcccttcaggataatgcggcc
tcgccgggcgcagcaaccattcgcgccgcctatgtgccgcttggccacaagaccgggcga
gatgacctgttcagcgacggcctgaaactggcggaaaaccagatcccgatggatgcggcg
cttaccgccttgaagggcctactggaagatgcttcggttctaaaagtggcgcagaacctg
aaatacgattaccttgtcatgaagcggcacggcattgttatcaggggcttcgacgatacg
atgctgctgtcctatgtgctggaagctggcgtcggcgcgcatggcatggacagcctgtcg
gagcggtggctcggacatacgcccatcccctataaggaggtcgctggctccggcaaatcg
cttgtcaccttcgatctcgtcgatatcgacaaggccaccgcctacgccgcagaagatgcg
gacgtcacgctgcgtctctggctggtgctgaaaccacggcttgccgccgtcggtctggcc
cgcgtctatgagcggctggaacggcccctggtgccggttctggctgatatggaagagcgc
ggcattaccatcgaccgacagatcctctcgcggctgtctggcgagttggcacagaaggcc
gccgcctttgaggatgaaatttacgaattggctggcgagcgcttcaatgtcggctcgccc
aaacagctgggcgatatcctgtttggcagaatgaacctgcccggcggctcaaaaaccaag
accggccaatggtcgacgtccgcgcaggtgctggaagatctggccgcccagggtgagccc
ctgccccgcaagatcgtcgattggcgccagctgaccaagctgaaatccacctataccgac
gccctgcccggctatgtccacccgcagaccaagcgggtccacacatcctattcgatggcg
gccaccaccaccggtcgcctgtcgtcatccgagccgaacctgcaaaatattccggtgcgc
acggcagaaggccgcaagatccgcaccgccttcatttccaccccaggccataagctactg
tctgccgactatagccagatcgagctcagggtactggcgcatgtggcggatattccgcaa
ttgcgtcaggcctttgccgatggggtcgatattcatgcgatgacggcctctgaaatgttc
ggcgtgcctgtggatggcatgccgtctgaagtccgccgccgcgccaaggcgatcaatttc
ggaatcatctacggtatttccgccttcggtcttgccaaccagctcagcattgagcgggcg
gaagcgggcgaatacatcaagaaatatttcgagcgcttccccggcatcaaggactatatg
gaaagcaccaaggctttcgtgcgtgagcatggctatgtggaaaccattttcggacggcgc
gcccattacccggagatcaaatcctcaaacccgtcaatgcgggccttcaacgagcgggca
gccatcaacgcgccgatccagggttccgccgccgatgtcatccgccgcgccatggtgcag
gtggaaccggcgctggccaaggccgggcttggcgagaaaacccggatgttgctccaggtg
catgacgaactgatcttcgaagtcgaggatgaggccatcgaggctgccttgccggtgatc
gtctccaccatggaaaatgccgccatgcccgccatcgccatgcgcgtcccactcaaagtc
gatgcccgcgccgccgataattgggacgaagcgcattga
DBGET
integrated database retrieval system
