Allorhizobium ampelinum: Avi_0389
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Entry
Avi_0389 CDS
T00851
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Avi_0389 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_0389 (mutM)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Avi_0389 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Avi_0389 (mutM)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Avi_0389 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ACM35267
UniProt:
B9JZF5
LinkDB
All DBs
Position
1:333812..334705
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AA seq
297 aa
AA seq
DB search
MPELPEVETVKRGLAPSMEGRRLTRLELRRTDLRFPLPVDFAARTQGRLIVSLSRRAKYL
LIDLDDGVSIVSHLGMSGSYRIEAANETGLPGQFHMARSRDEKHDHVIFHLSGPEGDPLR
VIYNDPRRFGFMDMVERRHMDRHAAFAGLGPEPVGNALDADYLAFRFKGKAQPLKTALLD
QKVIAGLGNIYVCEALWRAHLSPETPARALVNAEGKPVAALEDLTQAIRTVIAEAIEAGG
SSLRDHIQADGSLGYFQHSFNVYDREGEACRTPGCTGTVERMTQAGRSTFHCPQCQR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaggtggaaaccgtaaaacggggactggcgccatccatggagggg
cggcggctgacccgcctggaacttcggcggacggatctgcgctttcccttgccggtcgat
tttgcggcgaggacgcaaggccggcttatcgtctctctgtcgcggcgagcgaaatacctg
ctgatcgatctcgatgacggtgtctcgattgtctcccatcttggcatgtccggctcctat
cggatcgaagccgcaaatgagaccggcctgccgggccagttccatatggcgcgctcccgc
gatgaaaagcatgaccatgtgatctttcatctgagcgggccggagggcgacccattgagg
gtgatctataatgacccacgccgcttcggcttcatggatatggtcgaacgccgtcacatg
gatcgtcatgccgcctttgccgggctggggccggagccggtcggcaatgcgctcgatgcc
gactatctggccttccggttcaagggcaaggcgcagcctttaaagacggctcttctcgat
cagaaggtgattgctggtcttggcaatatctatgtctgcgaagctttgtggcgggcgcat
ttgtcgccggaaacacctgcgcgcgcgctggttaatgcagaaggaaagcccgtggcggca
ctggaagacctgacgcaggccattcgcacggtcatcgccgaggcgatcgaggctggcggc
tcctcgctgcgagatcatatccaggcggatggctcgctcggttatttccagcacagtttc
aatgtctatgaccgcgaaggcgaagcctgccgcacccccggctgcacagggacggtcgag
cgcatgacccaggcggggcggtctaccttccattgccctcagtgtcagagatga
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