Allorhizobium ampelinum: Avi_0409
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Entry
Avi_0409 CDS
T00851
Symbol
ihfB
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_0409 (ihfB)
03036 Chromosome and associated proteins [BR:
avi03036
]
Avi_0409 (ihfB)
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_0409 (ihfB)
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Avi_0409 (ihfB)
Chromosome and associated proteins [BR:
avi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Avi_0409 (ihfB)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Avi_0409 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
ACM35284
UniProt:
B9JZH2
LinkDB
All DBs
Position
1:350609..350920
Genome browser
AA seq
103 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALASGNRVELRGFGAFSVKNRPSRT
GRNPRTGDTVFVEEKWVPFFKTGKELRERLNPGMDDEDDGDAD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatccgagctggtgcaaatcgttgcggcccgcaatccgcatctttatcaccgc
gacgtggaaaacatcgtcaacgccgttctggatgaaatcaccgatgcgctcgcgtccggc
aatcgtgtcgaattgcggggcttcggcgctttttcggtgaaaaaccgcccgtcgcggacc
gggcgcaatccccgcacgggggatacggttttcgtcgaggaaaagtgggtgccgtttttc
aagaccggcaaagagttgcgcgagcgcctcaatcccggcatggatgacgaggatgacggc
gacgccgactga
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