Allorhizobium ampelinum: Avi_0535
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Entry
Avi_0535 CDS
T00851
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid-CoA-ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00061
Fatty acid biosynthesis
avi00071
Fatty acid degradation
avi01100
Metabolic pathways
avi01212
Fatty acid metabolism
avi02024
Quorum sensing
avi04146
Peroxisome
Module
avi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Avi_0535 (fadD)
00071 Fatty acid degradation
Avi_0535 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Avi_0535 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Avi_0535 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
avi01004
]
Avi_0535 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avi04147
]
Avi_0535 (fadD)
Enzymes [BR:
avi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Avi_0535 (fadD)
Lipid biosynthesis proteins [BR:
avi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Avi_0535 (fadD)
Exosome [BR:
avi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Avi_0535 (fadD)
Exosomal proteins of breast cancer cells
Avi_0535 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACM35378
UniProt:
B9JQW5
LinkDB
All DBs
Position
1:complement(453416..455116)
Genome browser
AA seq
566 aa
AA seq
DB search
MNTLSRPESNFASRRIWLASYPASVPAELPPLDHESLPELFDENCVTYASRKAFTSMGRS
MTFQELGEQATKIAAWLQAEGFSKGDRIAVMMPNVLQNPVIVFGILKAGMIVVNVNPLYT
PRELAHQLKDSGAVAIFVLENFAHTVQAVMDKVSLRRVVVTSMGDMLGLKGHLVNFIVRK
VKKLVPAWSIANSRSFASVLAAGGKARLRPETLSRNDIAFLQYTGGTTGVSKGAVLTHGN
LIANTMQMSLWLGSAFDTRPRPETLTFICALPLYHIFALTVNALMGIACGGHNILIANPR
DIPGFAKELSRYDFNVIIGLNTLFNALMNNEAFRKLDFSHLQLTFAGGMSVQRPIAERWH
QITGCPITEGYGLSETSPVATANRMNDKDFSGCIGMPISSTDVDIRDEQGESLALGEVGE
ICIRGPQVMAGYWQRPEETARAISEDGFFRTGDMGFMDARGYTKIVDRKKDMILVSGFNV
YPNEIEEVAVMHPGVLEAAAIGVPDPHSGEAVKLFVVRKDPSLTEQQVKDHCATNLTNYK
RPRHVAFLEELPKSNVGKILRKDLRP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatactctgtccaggcctgaaagcaattttgcatctcgccgaatttggcttgcatcc
tatcctgcctcggtgcctgcggaactgccgccccttgatcacgaatcgctgcctgaactc
ttcgatgaaaactgcgtgacctacgcgtcccgcaaggccttcaccagcatgggccgctcc
atgaccttccaggagcttggcgagcaggcgacgaaaattgccgcctggctgcaagcggaa
gggttcagcaaaggcgaccggatcgccgtgatgatgcccaatgtcttgcaaaacccggtt
attgtgtttggcatcctcaaggctggaatgatcgtcgtcaatgtcaatccgctctatact
ccgcgcgaactggcgcatcagctgaaggattccggcgcggttgccattttcgtgctggag
aattttgcccacacggtccaggcggtgatggacaaggtgtcgctacgccgcgtggtcgtt
accagcatgggcgacatgcttggcctgaagggccatctggtgaatttcatcgttcgcaag
gtgaagaagctcgtgccagcctggtcgattgccaattcccgaagcttcgcatcggtgctc
gcggcaggtggaaaagcccgactgcggcctgaaaccctttcgcgcaacgatatcgccttt
ctgcaatatacaggcggtacgacaggggtttccaagggggcggtgctgacccacggcaac
ctgatcgccaataccatgcagatgtcgctgtggttggggtccgctttcgatacgcgccca
agaccggaaacgctgaccttcatctgcgctttgccgctctatcatatctttgcgctgacc
gtgaacgccctgatgggcattgcctgcggcggccacaacattctgatcgccaatccgcgt
gacattccaggctttgccaaggaactgtcccggtatgatttcaatgtcatcatcggcttg
aatacgctgttcaatgctctgatgaacaatgaggccttccgcaagctggacttttcccat
ctgcaactgacctttgccggtggcatgtcggtgcagcggccgattgccgaacggtggcat
cagattaccggctgcccgatcaccgagggttacggcctgtctgaaacatcgccggtggca
accgccaatcgcatgaacgacaaggacttcagcggctgcatcggcatgccgatttcctcc
accgatgtcgacatccgtgatgaacagggcgaaagcctggctttaggagaagtcggggaa
atctgcattcgcggaccgcaggtcatggccggctactggcaacgaccggaagaaacggcg
cgggcgataagtgaggacgggtttttccgcaccggtgacatgggcttcatggacgcgcgc
ggctataccaagattgtcgaccgcaagaaggatatgatcctggtctccggcttcaatgtc
tatcccaacgagatcgaggaagtcgcggtcatgcatcccggcgtgctggaggccgcggct
atcggtgtgccggacccgcattccggtgaagccgtcaaactgtttgtggtgcgcaaagac
ccaagcttgacggagcagcaggttaaggaccattgcgccacaaacctgaccaattacaag
cgtccccgccatgtggcctttcttgaagagctgccgaaatccaacgtcggcaagattctg
cgcaaggatctgagaccttaa
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