Allorhizobium ampelinum: Avi_0628
Help
Entry
Avi_0628 CDS
T00851
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00521
Streptomycin biosynthesis
avi00523
Polyketide sugar unit biosynthesis
avi00541
Biosynthesis of various nucleotide sugars
avi01100
Metabolic pathways
avi01110
Biosynthesis of secondary metabolites
avi01250
Biosynthesis of nucleotide sugars
Module
avi_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Avi_0628 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Avi_0628 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Avi_0628 (rfbC)
Enzymes [BR:
avi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Avi_0628 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACM35448
UniProt:
B9JR35
LinkDB
All DBs
Position
1:546156..546719
Genome browser
AA seq
187 aa
AA seq
DB search
MSQRFQPEDTAIPGLTLLTRSRFGDERGFLSRLFCGEELAAFGWPGPVLQVNETGTVQKG
TVRGLHFQHAPFGEWKLVTCVEGTILDVALDLRKGSSSFLQHVCVELSGDNCRSLLIPPG
FAHGFQALSDTVRMIYTHSAPYRAEAEGGLHPQDARIGITWPLPVERLSARDQSHPLIQP
DFEGLIA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacgtttccagcccgaagacaccgcgattcccggcctgacgctgctgacccgc
agccggtttggcgacgagcgtggttttctcagtcggttgttttgcggtgaagaacttgca
gcttttggctggccggggccggtcttgcaggtcaacgaaaccggcacggtgcaaaaaggc
accgtgcgcggcctgcattttcagcacgccccttttggcgagtggaaactggtgacctgc
gtcgaaggcacaatcctcgacgtggccttggatctgcgcaagggctcgtcgagctttctc
cagcatgtctgtgtcgagctgtcgggcgacaattgccgctcgctgctgatcccgccgggt
tttgcccatggctttcaggcactgagcgacaccgtgcggatgatttatacccattccgcg
ccttaccgtgctgaggctgaaggcgggcttcacccgcaggatgcaaggatcggcatcacc
tggcctttgccggttgagcggctgtcagcccgagaccagagccatccgctgatccagccc
gattttgaaggactgattgcatga
DBGET
integrated database retrieval system
