Allorhizobium ampelinum: Avi_1114
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Entry
Avi_1114 CDS
T00851
Symbol
prsD
Name
(GenBank) rhiziobicin secretion
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
avi
Allorhizobium ampelinum
Pathway
avi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Avi_1114 (prsD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avi02000
]
Avi_1114 (prsD)
02044 Secretion system [BR:
avi02044
]
Avi_1114 (prsD)
Transporters [BR:
avi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Avi_1114 (prsD)
Secretion system [BR:
avi02044
]
Type I secretion system
Multiple protein transporter
Avi_1114 (prsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_22
AAA_29
Mg_chelatase
S_4TM
AAA_33
AAA_30
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACM35795
UniProt:
B9JT82
LinkDB
All DBs
Position
1:complement(941615..943411)
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AA seq
598 aa
AA seq
DB search
MSRSKTTRGGVEELQAALARSKAGFLSIALFSFFVNLLVLTGPLFMLQVYDRVLAARSEA
TLLVLFLLVILLYAIMGILDHVRSRIAARIGARLQSEFDIRVFRALLDRSALASKGVAGP
RGMRDLDALQKMLASSAIFAVFDIPWTPVFLFVIFVFHPWMGYLALAGGLVLIALTLLNQ
RGTKRIQAKAADASRISDEMTMALARDAETVKALGMRKSAATRWQATRHTALAASIAYSD
ANGFYTAVSKTFRIFLQSAILALGAWLVLRGEIKAGAMIAGSILIGRALAPIETAISQWG
LMQRAQEGWRNLSTLLEQIPEEDSRTTLPRPRAILQVQQVTAVPPGESVATLRMMSFELG
PGHALGVIGPSGSGKSTLARLLTGVWQPMAGKIRLDGAALDQYGPDGLADHVGYLPQDVV
LFEGTIAENIARLTADPDPDKVIAAARKAAAHEMILKLPQGYDTPLPATGQRLSGGQKQR
IGLARALYGDPVLLILDEPNSNLDAEGSVALNMAIRALKASGGAAVIMAHRPAAIEECDL
VLIMDHGARTAFGPRDEVLRAHLRNAQQVVGTKTNTSWGNAKQETTMTGFVPGAPRKP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagtaagaccacgcgcggcggcgtcgaggagttacaggcagccctggcgcgc
agcaaggcgggcttcctgtccattgccctgttcagtttcttcgtcaaccttctggtcctg
accggacccttgttcatgcttcaggtctatgaccgggtgctggcggcgcgctctgaggcg
acgcttctggtcctgtttctgctggtcattctgctctatgcgatcatgggcattctcgac
cacgtccggtcacgcatcgccgcccggatcggggcacggctccagagcgaattcgacatc
agggtgtttcgtgccctgctcgatcgatccgcactggcatcgaagggcgttgccggtcca
cgcggcatgcgcgatctggacgccctgcaaaaaatgctggcgtcctcggcgatttttgcg
gtttttgacattccatggacgccggttttcctgttcgtgatcttcgttttccatccctgg
atgggctatctggcgctggcgggtgggctggtgctgatcgcgctgacactgctgaaccag
cgcggcaccaagcgcatccaggcaaaagctgcggatgccagccggatcagcgacgagatg
accatggcgctggctcgtgacgccgaaacggtcaaggccttgggcatgcgcaagagtgcg
gcgacccgctggcaggcgacgcgccacacggcgctcgccgccagcattgcctattcggat
gccaatggcttttacacagccgtgtccaaaaccttccggatcttcctgcaatcggccatt
ctggcgctgggtgcctggctggtgctgcgcggcgaaatcaaggctggcgcgatgattgcc
ggatcaatcctgatcggccgggcgctggcaccgattgagacggccatttcccaatgggga
ctaatgcagcgggcgcaggaaggctggcgcaatctctcaaccctgctggagcagattccc
gaggaagacagccgcaccaccctgccgaggccccgtgccattttgcaggttcagcaggtt
accgccgtaccgcccggcgaaagcgtggcgacgctgcggatgatgagtttcgagcttggc
cctggccatgcgctgggcgtgatcggccccagtggttccggcaaatcgacccttgcccgg
ctgctgaccggtgtctggcagccgatggcgggcaagatccggctggacggcgccgctctg
gaccaatacggcccagacgggctggccgaccatgtcggctatctgccgcaggacgtggtg
ctgtttgaagggacgattgccgaaaacatcgcccgcctcaccgccgatcccgacccggac
aaggtgattgccgccgcccgcaaggctgcggcccatgagatgatcctgaaactgccacag
ggttacgacacccccctgcccgccaccggccagcggctttccggtgggcagaagcagcgc
atcggccttgcccgcgcgctctacggcgatccggtcctgctcattctggacgagccgaat
tccaatctggatgccgaaggctccgtggcgctgaacatggccatccgcgccctcaaggcc
agtggcggcgctgccgtgatcatggcgcatcgcccggcggcgattgaggaatgcgacctg
gtgctgatcatggaccatggcgcccgcaccgcttttggcccgcgcgacgaggtgctgcgc
gcccatctgcgcaatgcccagcaagtggtgggtacgaagacaaatacgtcatgggggaat
gccaaacaggaaaccaccatgaccggtttcgtacccggcgccccgcgcaagccatag
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