Allorhizobium ampelinum: Avi_1204
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Entry
Avi_1204 CDS
T00851
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_1204
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Avi_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_30
AAA_10
TrwB_AAD_bind
T2SSE
nSTAND3
DUF5852
Hydrolase
AAA_28
AAA_7
AAA_19
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACM35857
UniProt:
B9JTE4
LinkDB
All DBs
Position
1:1016473..1018056
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AA seq
527 aa
AA seq
DB search
MLEDGKLFLGASRKPDDAFNAPEYLDLKLANRHGLITGATGTGKTVTLQILAEGFASAGV
PVFCADIKGDLSGIAAPGEAKDFLIKRAEEIGLSPYPFEEFPVTFWDLYGEKGHRVRTTI
AEMGPLLLARLMEASEAQEGVLNIAFKIADEGGLALLDLKDLQALLSYMAENSSELSGRF
GLISKSSVGSLQRALLLLESQGADQFFGEPALSIQDIMRVAPDGRGTISVLAADRLMMNP
RLYATFLLWLLSELFEELPEVGDMAQPKLVFFFDEAHLLFRDAPKVLVERVEQVVRLIRS
KGVGVYFVTQNPLDVPETILAQLGNRVQHALRAYTPREQKAVKTAAETFRPNPAFSCEEA
ITALGTGEALVSTLQGKGVPSMVERTLIRPPSARIGPLTDNERTAIIGASPMANLYDRTI
DRHSAFEILAERAEKATGRSGADGRTDDGAEGTSAASRWKLPGFGDEAPEQKTTTTRQAP
DRTAPPGRQRQTVIEAAMKSAARSLASQVANQLGRALVRGILGSLKR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagatggaaaattgtttctcggtgccagccgcaagccggatgatgcgttcaac
gcaccggaatatctggatctgaaacttgccaaccgccacggcctcatcaccggcgccacc
ggcaccggcaagaccgtgacgctgcaaatcctggccgaagggttcgccagtgcgggtgtt
ccggtgttctgcgccgacatcaagggcgatctgtcgggcatcgccgcgccgggggaggcc
aaggatttcctgatcaagcgcgctgaggagatcgggctttcgccctatcccttcgaggaa
tttccggtcaccttctgggatctctacggcgaaaagggccatagggtccgcacaaccatc
gccgaaatgggaccgcttctgctggcccggctgatggaggcctcggaagcccaggaaggt
gtgctgaacattgccttcaaaatcgccgatgagggtggactggcgctgctggacctcaag
gatctgcaggcgctgctgagctatatggcggaaaattccagtgaattatcgggtcggttc
gggctgatctccaaatcctcggttggctcgctgcaacgggcgctgctgctactggaaagc
cagggtgccgaccagtttttcggtgaaccggcgctgtccatccaggatatcatgcgggtt
gcgccggatgggcgagggacgatttcggtgctggccgccgaccgactgatgatgaaccca
cggctttatgccacgttcctgctctggctgttgtcggaactgttcgaggaactgcctgaa
gttggcgatatggctcagcccaaactggtatttttctttgatgaggcgcatctcttgttt
cgcgatgcgccgaaagttcttgtcgagcgggtggagcaggtggtgcggctgatccgatcc
aagggcgtcggggtctatttcgtcacgcaaaatccgctggatgtgcccgaaaccattctg
gcgcaattgggcaaccgggtgcagcacgcactgcgcgcctatacgccccgcgaacagaag
gcggtgaagactgccgctgaaaccttccggcccaatccggccttttcctgcgaagaggcg
attacggcacttggcaccggtgaggccctggtctcgacccttcagggcaagggtgtgccc
tccatggtcgaacgcaccctgatccgcccgccctccgcccgcattggcccgctgaccgac
aacgagcggacggcaatcatcggcgccagcccgatggcgaacctctacgatcgaaccatc
gaccggcactcggccttcgaaatcctcgcggaacgggccgaaaaagccactgggcgcagc
ggggccgacggtaggaccgatgacggtgccgaaggcaccagcgccgccagtcgctggaaa
ttgccgggctttggcgatgaagcaccagagcaaaaaaccaccaccacccgccaagcgcct
gaccgcactgcaccccccggccgccaacgccaaacggtgatcgaagccgcaatgaaaagc
gccgcccgctccctggccagccaggtcgccaaccagctcggccgggcgctggtccggggg
attcttgggagtttgaaacggtag
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