Allorhizobium ampelinum: Avi_1449
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Entry
Avi_1449 CDS
T00851
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Avi_1449 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avi03019
]
Avi_1449 (rnc)
03009 Ribosome biogenesis [BR:
avi03009
]
Avi_1449 (rnc)
03036 Chromosome and associated proteins [BR:
avi03036
]
Avi_1449 (rnc)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Avi_1449 (rnc)
Messenger RNA biogenesis [BR:
avi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Avi_1449 (rnc)
Ribosome biogenesis [BR:
avi03009
]
Eukaryotic type
90S particles
RNase
Avi_1449 (rnc)
Prokaryotic type
rRNA processing factors
Avi_1449 (rnc)
Chromosome and associated proteins [BR:
avi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Avi_1449 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ACM36032
UniProt:
B9JUN7
LinkDB
All DBs
Position
1:1219474..1220193
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AA seq
239 aa
AA seq
DB search
MKAPKALTAEEREKVEAVIGYHFIGKERLDKALTHSSARPAKGSDYERLEFLGDRVLGLC
VAEHLFKVFRAATEGELSVRLNQLVSAETCAAVADEIQLHRYIRTGADVKKLTDKNMLNV
RADVVESLIAAIYLDAGLEAARAFVLKFWAERASRQDAGRRDAKTELQEWAHAKFAVTPV
YRVADRSGPDHDPSFTVTVEIGKLEPETGIDRSKRAAEQAAATRLLEREGVWTRSTASD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcccaaggccctgactgctgaagaacgcgaaaaagtggaggccgtgatcggc
taccactttattggcaaggaacggctggataaggcgctgacccattccagtgcgaggccc
gccaagggtagcgattatgagcgcctggaattcctgggcgaccgggtgcttggcctttgc
gtggccgagcatttgttcaaggtgtttcgcgctgccaccgaaggtgagttgtcggtgcgg
ctgaaccaattggtcagcgcggagacctgtgcggcggtggccgatgaaattcagctgcat
cgctatatccgcaccggtgccgacgtcaaaaagctgacagacaagaatatgctgaatgtg
cgggccgatgtggtggaaagcctgattgccgccatttatcttgatgccgggctggaagcg
gcgcgtgccttcgtgttgaagttctgggctgagcgtgcctcccggcaggatgccggtcgg
cgtgacgcaaagaccgagctacaggaatgggcacacgcgaaatttgccgtgacacctgtc
tatcgggttgcggaccgctctggaccggatcatgatcccagcttcacggtcacggttgaa
atcggcaagctggagccggaaaccggaattgaccggtcgaagcgcgccgcagaacaggcg
gcggcgacccggttgctggaaagagaaggcgtgtggacgagatccaccgcctcagattga
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