Allorhizobium ampelinum: Avi_1489
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Entry
Avi_1489 CDS
T00851
Symbol
peh
Name
(GenBank) Polygalacturonase/Pectinase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00040
Pentose and glucuronate interconversions
avi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Avi_1489 (peh)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
Avi_1489 (peh)
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GFIT
Motif
Pfam:
Glyco_hydro_28
SH3_KIN17_C
Motif
Other DBs
NCBI-ProteinID:
ACM36064
UniProt:
B9JUR9
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All DBs
Position
1:1247490..1249124
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AA seq
544 aa
AA seq
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MPGPVFARLFQRSALGRMLGAVAICTLSPVTVWAAEPAVATQWGSMTAPEVPSNLCATLT
AGLTAKDGSLDHADADGKAPHPDQMRLQAAIDGCAGGAVKLVPGAEGQDAFLSGPLNLKS
GVMLWIDKGVTLFASRDPKDYDSGAGDCGTANTSSAKTCKPLIAAKDTNGAGIVGEGRID
GRGGSLLLSGDNAGKRSWWDVAWQSKQGLIQHVFRLVEIDGGENFTLHRITLLNSPNFHV
VSNGVTGLTAWGIKILSPSAVYTRPNYACPPETTPDKLTPATCFTPDTVKNTDGFDPGQS
SKVVLAYSAISTGDDHVAIKAGGDKPSTRMTFAHNRFYYGHGMSIGSETDAGVDGIHVYD
LVMDGHDSPNGNGLRIKSDTSRGGKVTNVLYEDVCMRNVAFPLVFDTRYSDKAGDRIPDF
SGITVRNLRYIGSTTGSGGHVVLRGIKDDAHYQPLGLFLDTIQFDGPQPLLVGSADPAAK
DPPLNAHVTLGPGPVSFADLLKADPARRVKTVNLVDASEEDPVPPLDCSSAFVPFSSFLD
GSPF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacctgtttttgcccgcctgtttcaacggtctgctttaggtcggatgcttggc
gcggtcgccatttgcaccctgtcgccggttactgtctgggcggcggagccggctgttgcc
acccaatgggggtcgatgaccgcgccggaggttccctcaaatctctgcgcgacattgacg
gctggcctgacggccaaggacggctccctcgaccatgccgatgccgatggcaaggctccc
catccagaccagatgcgcttgcaggctgccattgacggctgcgcgggcggtgccgtcaag
ctcgtcccgggggctgaggggcaggatgcgtttttgagcggaccgctgaacttgaagagc
ggcgtcatgctgtggatcgacaagggcgtgacgctgtttgcctcccgcgatcccaaggat
tacgacagcggtgctggtgattgcggtacggccaacacctcatccgccaagacctgcaag
ccgctgattgcggccaaggacaccaacggcgctggcatcgtcggtgaggggcgcatcgat
ggacgcggcggttcgctgctgttgtccggcgacaatgccggtaagcgatcctggtgggat
gtggcctggcaatccaagcaggggttgatccagcatgtgttccggctggtagaaattgat
ggcggcgagaatttcaccctgcaccggattacgctgttgaacagcccgaattttcatgtg
gtgagcaatggtgtgacgggcctgaccgcctgggggatcaagatcctcagccccagtgcc
gtctatacccgcccaaattacgcttgcccgccggagaccacgcctgacaaactgacgccc
gccacctgtttcacgcctgatacggtcaaaaataccgatggtttcgacccgggtcagtcc
tcgaaagtcgtgctcgcctacagcgcgatcagcaccggcgacgatcatgtggcgatcaag
gcgggcggcgacaaaccatcgacgcgcatgacttttgcccataaccggttctattacggc
catgggatgtcgattggctccgagaccgatgctggcgtggacggtatccatgtctatgat
ctggtgatggatggccatgatagtcccaacggcaatggcctgcggataaagtcggacacc
tcgcgcggcggcaaggtcaccaatgtgctgtatgaagatgtctgcatgcgcaatgtcgcc
tttcccttggtgttcgatacccgctactcggacaaagccggcgatcgtatcccggatttt
tccggcatcacggtgcgcaacctgcgctacataggcagtacgaccggcagcggcggccat
gtggttctgcgtggcatcaaggatgatgcgcattaccagccgctcggccttttccttgat
accattcagttcgatgggccccagccgctcctggtcggctcagccgatccggccgcaaaa
gatccgccgctcaatgcgcatgtcacgctggggcctggtccggtcagctttgccgacctt
ctgaaggcagatccagcgcgccgggtgaaaactgtcaatctcgtggatgccagtgaagaa
gatccggttccgccgctcgattgctcgtcggccttcgtaccgttctcgagctttttggat
gggtcgccgttttga
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