Allorhizobium ampelinum: Avi_1731 Help Entry Avi_1731          CDS       T00851                                  Name (GenBank) metal dependent hydrolase   KO K12574   ribonuclease J [EC:3.1.-.-] Organism avi  Allorhizobium ampelinum Pathway avi03018   RNA degradation Brite KEGG Orthology (KO) [BR:avi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     Avi_1731  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:avi03019]     Avi_1731 Messenger RNA biogenesis [BR:avi03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      Avi_1731 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP Lactamase_B_2 RNase_J_C Lactamase_B RMMBL Anti-Pycsar_Apyc1 Motif Other DBs NCBI-ProteinID:  ACM36241 UniProt:  B9JVG1 LinkDB All DBs Position 1:1444652..1446319 Genome browser AA seq 555 aa AA seqDB search MTKTDELVFLPLGGVGEIGMNLALYGFGPPKNREWIMVDCGVTFPGPDLPGVDLVLPDIR FVLSQKNRLKAIFITHAHEDHYGGLNDIWPGLNVPVYASGFTAGMLEAKRNYEGTRAEIP VTPFKPGDKVHVGPFVVEASDVNHSIPEPMSLIIRTPLGNVIHTGDWKIDHAPSLGPLTD EARFRALGDEGVLAVMCDSTNAMREGVSPSEQEVSEGLRKIIQTAEGRVAITTFSSNVGR IRSIAKAAEAAGREVLLLGSSLKRVVGVARDVGLMEGVQPFIAEDEYGYIPRDKVVVILT GSQGESRAALAKLSRDEMRNVALTKGDTVVFSSRAIPGNEKPINDIKNGLIEQGVTIVTD SDALVHVSGHPRRNELLQMYQWTRPQILVPVHGEAAHLTAQQKLALEAGIAQVPKVRNGD ILRLAPGPAEVIGEAPYGRVFKDGKLLGDFEQMGIGERRKLSFAGHVSVSVLLDERFEFR DDPEVVAHGLPAEDLEGDDMEDILYDAVLSAVESIPRTRRKDLGALRESIRRAVRSTANE CWGKKPVVTVFVTKV NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgacaaagacagacgaactggtatttctgccgctgggcggcgtaggtgaaatcggcatg aacctggcgctttacggctttggcccgccgaagaaccgggaatggatcatggtggattgc ggtgtgaccttccctggtcccgatctgcctggtgtggatctggtgctgccggacatccgc ttcgttctctcgcagaaaaacaggctcaaggcgatcttcatcacccacgcgcatgaagat cattatggtgggctaaacgatatctggccgggcctgaatgtgccggtctatgcctcgggt tttaccgctggcatgttggaagccaagcggaattatgagggaacccgggctgaaattccg gtaacgcccttcaagccaggcgacaaggtccatgtcggcccctttgttgtcgaggcttcg gacgtcaaccattccattcccgagccgatgtcgctgattattcgcacaccgcttggcaat gtcatccatactggagactggaagattgaccatgcgccgtcgcttggcccgctgaccgat gaggcgcggttccgcgctcttggtgacgagggcgttctggcggtgatgtgcgatagcacc aacgcgatgcgggagggcgtttcgccctccgagcaggaagtctcggaaggattgcgcaag atcatccaaacagcagaggggcgcgtggcgatcaccacgttttcctccaatgtcggacgt atccgctcgattgccaaggcagccgaggcagcaggccgcgaagtcctgctgttgggcagc tccctgaagcgggtcgtcggtgtggcgcgcgatgtcgggctgatggaaggcgtgcagccc tttatcgccgaggacgaatatgggtacattccccgcgataaggtcgtggtgatcctgaca ggtagccaaggtgagtcgcgcgcggcgcttgccaagctatcgcgcgatgaaatgcgcaac gtggcgctgaccaaaggcgacacagttgttttttcgtctcgcgctattcccggcaatgaa aagccaatcaacgatatcaagaatggcctgatcgagcagggcgtcaccatcgttaccgat agcgacgcgctggtgcatgtctccggtcacccacgccgcaacgaacttttgcagatgtac caatggacgcgcccgcaaattcttgtccctgttcatggcgaggcggcccatctaacggcg cagcagaaactggctctggaggcggggattgcgcaggtgccgaaagtccgcaatggcgac atcctgcggttggcgcctggtcctgccgaagtcatcggtgaagcgccgtatggcagagtc ttcaaggacggcaagctgctgggcgatttcgagcagatgggcattggtgagcggcgtaag ctgtcttttgcaggccatgtgtctgtcagcgttctcctggacgaacgctttgagttccgc gacgatccggaagtggttgcccatggcctgccagcggaagatctggaaggtgatgacatg gaggacattctctatgacgccgtgctgagcgccgtcgagagcattccgcgcactcggcgc aaggatcttggcgctttgcgtgaaagtatccgtcgtgctgtgcgctctacggccaacgag tgctggggcaagaagccggtcgttacggtttttgtgaccaaggtctga

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