Allorhizobium ampelinum: Avi_1880
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Entry
Avi_1880 CDS
T00851
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_1880
Enzymes [BR:
avi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Avi_1880
DNA repair and recombination proteins [BR:
avi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Avi_1880
Prokaryotic type
Avi_1880
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACM36348
UniProt:
B9JVR8
LinkDB
All DBs
Position
1:complement(1553603..1555054)
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AA seq
483 aa
AA seq
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MPNAHPSPTILWFRKDLRLDDNRALLAALQAAGPVIPLYIREPEEMGTGPLGPAQAWWLH
HSLVSLDQSLQSYGSRLVLRRGPPGQVLRHLIEETGSKAVHWNRRYDPSGMAIDAELKAA
LRSDGLEATSHAGFLLHEPSKVKTGSGGPFRVYTPFWRALEKQGDPPPPVERPKTLHNPA
HWPDSDRLEDWQLLPTKPDWAKEFSEIWTPGEPGAQDKLSQFIDHGLKGYRTQRDFPALP
HTSGLSPHLALGEISPARIWHATIGLGDDVSTDDYVHFRKELVWREFSYHLLFHFADLAS
QNWNDRFNDFPWKKNAEFLSAWQRGQTGYPIVDAGMRQLWRHGVMHNRVRMIVASFLIKD
LMIDWREGEAWFRYTLVDADPASNAASWQWVAGSGADASPFFRIFNPITQSEKFDPDGDY
IRQFVPELAKLPNNLIHRPFEAPAPLLEKAGITLGKTYPAPLVDHKRARAVALEAYKSTG
SPD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgcccaccctagtccaaccatcctgtggttccgcaaggacctgcgtctcgat
gacaacagggcgcttctggcggcattgcaggccgcaggcccggtcatccctctctacatt
cgcgagcctgaggaaatgggtaccggcccgctcggtccggcacaggcatggtggctgcat
cactcactcgtcagcctcgaccagtcacttcaatcctacggcagccgattggttcttcgc
cgcggcccaccgggccaggtcctgcgccatctgattgaggaaaccggctccaaagccgtc
cactggaatcgccgttacgatccgtccggcatggccatcgatgcggagctgaaagccgct
ctgcgcagcgacgggcttgaagccactagccatgccggcttcctgctgcatgaaccgtcg
aaggtgaaaaccgggagcggcgggcctttccgtgtctacacacccttctggcgagctctt
gaaaagcaaggcgatccaccgccgcccgtcgagagacccaagaccttgcacaaccctgcc
cattggccggatagcgaccggttggaagactggcaactgctgccgaccaagccagattgg
gcaaaggagttttcggaaatctggactccgggagagcccggcgctcaggacaaactgagc
cagtttatcgatcatggcctcaagggttaccgcacgcagcgggatttccccgccctgccc
catacatccggcctgtcgccgcatctggcgctcggggagatttctccggcgcgtatctgg
catgcaaccatcggccttggcgatgatgtgtccaccgacgactatgtgcattttcgaaaa
gagctggtctggcgcgaattttcctaccatctgctgtttcactttgccgatctggccagc
caaaactggaacgaccgcttcaatgactttccctggaagaagaacgcggaatttctatcc
gcctggcagcggggccagactggctatccgattgtcgacgcaggcatgcgccagctttgg
cgacatggtgtcatgcacaatcgtgtgcgcatgattgtcgcttcctttctgatcaaggac
ctgatgatcgactggcgcgaaggcgaagcctggtttcgttacacattggtcgatgccgat
ccagcgtccaatgccgccagctggcaatgggtggctggctccggcgccgatgcctcaccg
tttttccggattttcaacccgattacccagagcgagaaattcgatccggacggcgactat
atccgccaattcgtgccagagctggcaaaactgccaaacaacctgatccatcgcccattc
gaagcccccgcccccctgttggaaaaggcggggattacgcttggcaaaacctatccagcg
ccactggtagatcacaaaagagccagagccgtggcccttgaggcttataaatcaaccggc
tcgccggactga
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