Allorhizobium ampelinum: Avi_1988
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Entry
Avi_1988 CDS
T00851
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00521
Streptomycin biosynthesis
avi00523
Polyketide sugar unit biosynthesis
avi00541
Biosynthesis of various nucleotide sugars
avi01100
Metabolic pathways
avi01110
Biosynthesis of secondary metabolites
avi01250
Biosynthesis of nucleotide sugars
Module
avi_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Avi_1988 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Avi_1988 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Avi_1988 (rfbC)
Enzymes [BR:
avi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Avi_1988 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACM36417
UniProt:
B9JVY7
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Position
1:complement(1632921..1633484)
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AA seq
187 aa
AA seq
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MQFEETKLSGVFLITPKRFGDARGYFMETFRASLFESEVGPFTFVQDNKSFSAEVGTVRG
LHFQLNPRAQGKLVSCAAGALLDVAVDIRQGSPTYGQMVKAELTAENGCQLWVPPGFAHG
FCTLQPNTVISYKVTDYYSPDHDRGLLWNDPALAIDWPVTEDNAILSDKDKKQPKLSELE
TNFVYQP
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgaagaaacgaagctgtcgggcgtttttctaatcactccaaagcggtttggg
gatgcgcggggctatttcatggaaaccttccgcgccagcctgtttgaaagcgaagtggga
cctttcaccttcgttcaggacaacaagtcgttttcggccgaggttggtacggttcgcggc
ctgcatttccagttgaacccgagggcgcagggcaagctcgtttcttgtgcggctggcgct
ttgctggacgtcgctgtcgatattcgccagggctcgccgacctatggccagatggtgaaa
gccgaactgactgccgaaaacggctgccagctttgggtgccgccgggttttgcgcatggc
ttctgcacattgcagcccaataccgtgatcagctacaaggtgacggattattacagcccg
gatcatgaccggggcctgttgtggaacgatccggcgctggcaatcgattggccggtgacg
gaagacaacgccatcctgtctgacaaggacaagaagcagccgaaactgagcgagcttgag
acgaatttcgtctatcagccttaa
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