Allorhizobium ampelinum: Avi_2078
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Entry
Avi_2078 CDS
T00851
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avi01002
]
Avi_2078
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avi01011
]
Avi_2078
Peptidases and inhibitors [BR:
avi01002
]
Cysteine peptidases
Family C82
Avi_2078
Peptidoglycan biosynthesis and degradation proteins [BR:
avi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Avi_2078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACM36483
UniProt:
B9JW55
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All DBs
Position
1:1705531..1707375
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AA seq
614 aa
AA seq
DB search
MQKPSLNRALIAVLLTTSTVVAALPQTASATTLMDLLRGRSEERRQPAPAEIIPQAQLRD
PEPIQKVAAPRYYAYKAENKRAISIKAPDMPIPVFGEDHALAVAHLAMSQVKVEATPDVA
QAVENYYNNKGALIWASDTAITDKAKSAVAALATADTAGLEPADYAVKVPDGLDTMPEDA
RRQALMAFELNLSAKILTYVQDTVRGRLDPNRISGYHDFKRKTVNLDPVLDLVRSSPDIA
AYLHGRDPASPQFQALKAELAKLVAEANQQQSKPVKINLTGVLKPGGSNPELANIVEGIK
TYGSDALKTEHALTLTDYTGTPDYTPELVALVESYQKERGLKPDGVIGQATVRTMVGHSN
AEKIEKLVVAMEQLRWLPADLGPRYVFINQPAFEAYYFNDRQQQIAMKVVVGAPQHQTFF
FQNMIQTVEFNPYWGVPRSIIVNEMLPKLRQDPSYLDRLGYEVSYKGRKVASSQVDWYTT
SDVDVRQPPSSDNALGDLKILFPNAHAIYMHDTPAKSFFKRDMRALSHGCVRLAEPRVMA
AAVMGTTVEDIDAQIASGQNRAVQVPQKFPVYVAYFTAWPDKDGVVRYYDDVYGRDEATR
KAFDVTSTSRGVQS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaaaccttcactgaaccgggcgctgattgcagtcctcctgaccacgtccacggtt
gtggccgccctgccgcagacggcgagcgccacgaccctgatggatctgctgcgtggcagg
tcggaggaacgccgccaaccagcgccggcggaaatcattccccaggcccaattgcgcgat
ccagagccgatccagaaggtcgccgcacctcgctattatgcctataaggccgagaacaag
cgtgcgatctcaatcaaggcaccggacatgccgatcccggttttcggtgaagaccatgcc
ttggccgtcgctcatctcgccatgtcgcaggtcaaggtcgaagccacgcccgacgtggcg
caggctgtggaaaactattataacaacaagggcgcgttgatctgggccagcgataccgcc
atcaccgacaaggcgaagtcggcggttgccgccctggcaacggctgatacggcagggctt
gagccagccgattatgcggtgaaagtccctgatggtctcgacaccatgcccgaagacgcc
cgccgccaggcgttgatggccttcgaactcaacctttcggccaagatcctgacctatgtt
caggacacggtgcgcggcaggctcgatccgaaccgtatttcaggctatcacgatttcaag
cgcaagactgtcaatctcgatccggtgctggatctggtgcgctccagcccggatatcgct
gcctatctgcatggccgcgatccggccagcccgcaattccaggcgctgaaggctgagctt
gccaaattggtggcagaggccaatcagcagcagagcaagcccgtaaaaatcaatctgacc
ggcgttttgaagcctggcggcagcaatcctgagcttgccaatatcgtcgaaggcatcaag
acctatggcagcgacgcgctgaagaccgagcatgcgctgacgctgaccgactacactggc
acgccggattacacaccggaactggtggcgctggtcgagagctaccagaaggaacgcggt
ctgaaaccggatggcgtcattggccaggcaacggtccgcaccatggtcggacattcgaat
gccgagaagatcgaaaagctcgtggttgccatggagcaattgcgctggttgcctgccgat
ctggggccgcgctatgtgttcatcaaccagccggctttcgaggcctattatttcaacgac
cgccagcagcagattgccatgaaggtcgtggtcggtgcgccgcagcaccagactttcttc
ttccagaacatgatccagacggtggaattcaacccttattggggcgttccgcggtcgatc
atcgtcaacgaaatgctgcccaagctgcgccaggacccgagctatctcgatcgtctcggc
tatgaagtcagctacaagggccgcaaggtggcctcctcgcaagtcgattggtacacgaca
agcgatgttgatgtgcgccagccgccaagcagtgacaatgcgttgggcgacctgaagatc
ctgttcccgaatgcccatgcgatctacatgcatgacacaccggcgaagagcttcttcaag
cgcgatatgcgcgcgctcagccacggctgtgtgcgtcttgccgagccccgcgtcatggcc
gcagccgtgatgggtacgacagttgaagacatcgatgcgcagattgcttccggccagaac
cgcgccgtgcaggtgccgcagaagttccctgtttatgtcgcctatttcaccgcctggccg
gataaggatggagtggtccgctattacgacgacgtttatggccgcgatgaagcgacccgc
aaggccttcgacgtgacatcgacctctcgcggcgtgcagagttga
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