Allorhizobium ampelinum: Avi_2099
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Entry
Avi_2099 CDS
T00851
Symbol
uvrB
Name
(GenBank) excinuclease ABC B subunit
KO
K03702
excinuclease ABC subunit B
Organism
avi
Allorhizobium ampelinum
Pathway
avi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Avi_2099 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_2099 (uvrB)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Avi_2099 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Avi_2099 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ACM36496
UniProt:
B9JW68
LinkDB
All DBs
Position
1:1720710..1723715
Genome browser
AA seq
1001 aa
AA seq
DB search
MARSPKKSPVRNNDNPSQDEAGSPYAGGFEEAPQAAFEGAPLSGSVADWVKQLEAEAEAG
GIESQRELASKAGKHRKKIEIEARRHAEKIALEKSTGRKTEAADPVKAGRTAKAKSEDGG
SAMRTSRGVSIGASSDPATRAAAGLNPVSGMDTSLEEAQSLAPGAVTATVEALSALIESG
NPLFKGGKIWAPHRPARPEKSEGGIPIRMVSDYEPAGDQPTAIKDLVEGINAGERSQVLL
GVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKHFFPDNAVEYFVSYYDYYQP
EAYVPRSDTFIEKESSINEQIDRMRHAATRAILERDDCIIVASVSCIYGIGSVETYTAMT
FQMSVGDRIDQRQLLADLVAQQYKRQDINFVRGSFRVRGDTIEIFPAHLEDAAWRISMFG
DEIDAITEFDPLTGHKTGDMKSVKIYANSHYVTPRPTLNGAIKAIKEELKQRLAELEKGG
RLLEAQRLEQRTRYDIEMMEATGACAGIENYSRYLTGRAPGEPPPTLFEYIPDNALLFID
ESHVSVSQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPPTVAVSATPGS
WELEQSGGVFAEQVIRPTGLIDPPVEVRSAKTQVDDVLGEIKETSLKGYRTLVTVLTKRM
AEDLTEYLHEQGVRVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIPECGFV
AILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQITGSMRRAMDETSRRREKQVAY
NLEHGITPESVKSKISDILDSVYERDHVRADISGASGKGFAAGGHLVGNNLQAHLSALEK
QMRDAAADLDFETAARLRDEIKRLKEVELASMGDPGEKAAARAQEQAVAGQPASGATDVS
RQDSSETGSYFAKPSLDDMGPGTDTAKPLFRKNSLDEMTVGRTEKPVPGKLPEKPVPKIG
DSKIDDPRPIVRAKSGVGSYEDAGDQKRKTRTKGKTGKPGR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggccagatctccgaaaaaatctcccgtccgtaacaatgacaacccatcgcaggatgag
gcaggatcgccgtatgccggtgggtttgaagaggcaccgcaggcagcttttgaaggagcg
cccttgagcgggagtgtcgcagattgggtgaaacagctggaagccgaagcggaagcgggg
ggcatcgaaagccaacgggaactcgcctccaaggctggcaagcatcgcaagaagatcgaa
atcgaagcgcgcaggcatgccgaaaagatagcgcttgagaagagcacgggccgcaagact
gaggccgccgaccccgtaaaggccggtcgcactgccaaggccaagagcgaagacggcggc
agtgccatgcgcacctcacgcggcgtgtccatcggcgcatcttccgacccggccacgcgc
gctgctgccggtcttaatcctgtctctggcatggacacgtcgcttgaagaggcgcagagc
cttgcccccggcgctgtgacggcgaccgtagaggcgctgtcagcgctgattgaaagcggc
aatccgctgttcaagggtggtaagatctgggcgccgcatcggcccgccaggccggaaaag
tccgaggggggaatcccgatccgcatggtgtcggattacgaaccggcgggcgatcagcca
acggcaatcaaggatctggtggaaggcatcaatgccggggagcgcagtcaggttctgctt
ggggtgactggttccggcaagactttcaccatggccaaggtgatcgaggcgacccagcgg
ccagcggtgattctggcgccgaacaagacgctggcggcccagctctattcggaattcaag
cattttttccccgacaatgcggtggaatatttcgtttcctactacgattactatcagccg
gaagcctatgtgccgcgttcggatacgtttatcgagaaggaaagctcgatcaacgagcag
atcgaccgtatgcgccatgcagccacccgcgccatcctggagcgcgacgattgcattatc
gtcgcctcggtgtcctgcatctacggtatcggctcggtcgaaacctatacggcgatgacc
ttccagatgtcggtcggcgaccggatcgatcagcggcaattgctggccgacctcgtggcc
cagcaatacaagcggcaggacatcaatttcgtgcgcggctctttccgggtgcggggcgat
acgattgaaattttccctgcccacttggaggatgccgcctggcggatttcgatgttcggc
gacgaaatcgatgcgattaccgaattcgatccgctgaccggccacaagaccggcgatatg
aagtcggtgaagatttatgccaattcgcactatgtcacgccgcgcccgacgctgaatggg
gcgatcaaggcgatcaaggaggagttgaagcagcggctggccgagctggaaaagggcggg
cgtctgctggaggcgcaaaggctggagcagcgcacccgctacgatatcgaaatgatggaa
gcgaccggcgcctgcgcgggcattgaaaactattcgcgctacctgacgggccgcgcacca
ggcgaaccgccaccgaccttgttcgaatatattcccgataatgccttgctgttcatcgat
gaaagccatgtctccgtcagccagatcggcggcatgtatcgtggcgacttcaggcgcaag
gcgacgttggccgaatacggcttccggctgccatcctgcatggataaccgaccattgcga
tttgaggaatgggacgccatgcgtccaccaaccgttgcggtttcggcgacgcccggcagt
tgggagctggagcaatcgggcggcgtgtttgccgaacaggttattcgcccaaccggcctg
atcgatccgccggtcgaagtgcgctccgccaagacccaggttgatgatgtcttgggcgag
atcaaggaaacctcgctgaagggctatcgcacgctggtaacggtgctgaccaagcgcatg
gccgaagacctgacggaatatctgcatgagcagggcgtgcgggtgcgctatatgcattcg
gatatcgatactctggagcgtatcgaaatcctgcgcgatctcaggctcggtgccttcgat
gtgctggttggtatcaacctgctgcgcgaggggctggacattcctgaatgcggcttcgtc
gccattctcgatgcagacaaggaaggcttcctgcgctccgagacctcactgattcagacg
attggccgtgcggcgcgtaatgtcgatggcaaggtcattctctatgccgatcagatcacc
ggctccatgcggcgcgccatggacgagacgtcgcgtcgccgggaaaagcaggtggcttac
aatctcgaacacgggatcacgccggaatcggtcaagtcaaaaatttccgacattctcgat
tcggtctacgagcgcgaccatgtccgtgcagacatttccggagcgagcggcaagggcttt
gcggcgggcggtcatctggtcggcaacaatctccaggcccatctttcggcgctggaaaag
cagatgcgcgatgccgccgccgatctcgatttcgaaaccgcagcccgtttgcgcgacgaa
atcaagcgtttgaaagaagtcgaactggccagcatgggtgatcccggcgaaaaggcagcg
gcccgggcgcaagagcaagcggtggcaggccagcctgctagcggtgctaccgatgtttcc
cgtcaggattccagtgaaactggctcctatttcgccaagccatccctggatgacatgggt
cctggcacggacacggccaagccactgtttcgcaagaacagcctggatgaaatgactgtt
gggcggacggaaaagcctgttcccggcaagcttcctgaaaagccggttccgaaaatcggc
gattccaaaatcgacgatccacgccccatcgttcgcgccaaatctggggtcggttcctat
gaagatgccggggatcagaagcgcaagacacgcaccaaggggaaaactggcaagccggga
cggtga
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