Allorhizobium ampelinum: Avi_2381
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Entry
Avi_2381 CDS
T00851
Symbol
uvrA
Name
(GenBank) excinuclease ABC A subunit
KO
K03701
excinuclease ABC subunit A
Organism
avi
Allorhizobium ampelinum
Pathway
avi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Avi_2381 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_2381 (uvrA)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Avi_2381 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Avi_2381 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
DnaJ_CXXCXGXG
AAA_29
AAA_25
nSTAND1
AAA_21
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACM36696
UniProt:
B9JWR8
LinkDB
All DBs
Position
1:complement(1949051..1951972)
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNSLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDLIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRVLAFEEGTRLYILAPLIRGRKGEYKKELAELMKKGFQRV
KIDGQFYEIAEAPTLDKKYKHDIDIVVDRVVVRADMASRLADSLETCLRLADGLAVAEFA
DKPLPANETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGFQQKIDEALIIPEADKRLKDGAIAPWAKSSSPYYDQTLEGLGKAFGFKLTSKWSD
LSAEAQKSILHGTEEKIEFHYADGARSYSATKTFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACKGFRLKPEALAVKINGLHIGQVTEMSIRVAGGWFETLPGLLTDKQNEIAVR
ILKEIRERLSFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILAADYVVDIGPAAGIHGGQVIAKGSPQ
DIMANSKSLTGKYLTGELGVKVPPARRKPKKGQQIKVIGARGNNLKNVTAAIPLGVFTAV
TGVSGGGKSTFLIETLYKAAARRVMGARENPADHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFSGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKTKSIADVLDMTVEEGVEFFSAVPAVRDKLQALFDVGLG
YIKVGQQANTLSGGEAQRIKLAKELSKKSTGRTLYILDEPTTGLHFHDVAKLLEMLQELV
DQGNSVVVIEHNLEVIKTADHIIDFGPEGGDGGGQIVAQGTPEEIVKVEASYTGHFLREL
LERRPMKKPQAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattgaagacgatttccatccgtggtgcgcgcgagcacaatctcaagggcatc
gaccttgacctgccgcgcaacagcctgatcgtgatgaccggcctttccggctcgggaaag
tcgtcgctggccttcgatacgatctatgccgagggccagcgccgctacgtcgaaagcttg
tcggcctatgcccggcaattcctggagatgatgcagaagcccgatgtggacctgatcgaa
ggcctgtcgcctgcaatctccatcgagcaaaagaccacctcgcgcaatccgcgctcgacg
gtcggcactgtcaccgaaatctacgactacatgcgcctgctgtttgcccgcgttggcgtg
ccctattcgccagccaccggcctgccgatcgagagccagaccgttagccagatggttgat
cgcgtcctggcctttgaggaagggacccgactttatattcttgcgccactgatccggggc
cgcaagggcgagtataagaaagaactcgccgagctgatgaagaagggcttccagcgcgtc
aagatcgatggccaattctacgaaattgccgaggcgccaacactcgacaagaaatacaag
catgatatcgacattgtcgttgaccgcgtcgtggtacgggccgacatggcctcgcggctg
gccgacagcctggaaacctgccttcgccttgccgacgggttggcggtcgccgaatttgcc
gacaagccgctgccggccaatgaaacctcggctggcggttccgccaacaagtcgttgaac
gagacccatgagcgggtgctgttttcggaaaaattcgcctgccccgtctccggctttacc
attccggaaatcgagccccggcttttctccttcaacaatccgtttggcgcctgcccgacc
tgcgacggcctgggtttccagcagaagatagatgaagcgctgatcattcccgaggcagac
aagcggttgaaggacggcgcgattgccccttgggcaaaatccagctctccctattacgat
cagacccttgaaggtcttggcaaggctttcggcttcaagctgaccagcaaatggtcggat
ctgagcgccgaggcacagaaatccatcttgcacggcacggaagaaaagatcgagtttcac
tacgccgatggcgcgcgctcctatagcgcgacgaagaccttcgagggcatcgtcccaaac
cttgagcggcgctggaaggaaaccgatagtgcctgggcgcgagaagaaatcgagcgctac
atgtccgccgcgccctgcccggcctgcaagggtttcaggctgaagccggaagcgctggcg
gtgaaaatcaacggcctgcatatcggccaggtaacggaaatgtcgatccgggttgccggt
ggctggttcgagaccctgcctggtctgctgaccgacaagcagaatgaaattgccgttcgt
attctcaaggaaatccgcgaacgcttgagcttcctcaacgatgtcgggctggactatctc
agcctgtcgcgcaattccggcactctgtctggcggtgaaagccagcgcatccggcttgcc
tcgcagatcggctcaggcctgaccggcgtgctttatgtgctggatgagccatcgattggc
ctgcaccagcgcgataatgcccgccttctcgatacgctgaagcatctgcgcgatatcggt
aatacggtgatcgtcgtcgagcatgatgaggatgccattctggccgccgattatgtggtc
gatatcggtcctgcggcaggcattcatggcggccaggtgattgccaagggcagtccgcag
gatatcatggccaacagcaaatcgctgaccggcaagtatctgaccggcgagcttggcgtt
aaagtgccgccggcgcggcgcaagccgaaaaaaggtcagcagatcaaggtgatcggcgca
cggggcaacaatctgaagaatgtcacggcggccattccacttggtgtgtttaccgccgtt
actggcgtttccggtggcggaaaatcgaccttcctgatcgagacattatataaggccgca
gcacgacgggtgatgggcgcgcgcgagaaccccgccgatcacgaccggatcgatggtttc
gaattcatcgataaggtgatcgatattgaccagtcgccgattggtcgcacgccgcgctcc
aatcccgccacctataccggcgcatttacgccaatccgagactggttttctggacttcca
gaggccaaggcgcgcggttatcagcccggccgcttttccttcaacgtcaagggcggacgt
tgtgaagcctgccagggcgatggcgtcatcaagattgaaatgcacttcctgccggatgtc
tatgtcacttgcgacgtctgccacggcaagcgctataatcgcgaaacgcttgatgtgacc
tttaagacaaagtcgattgctgacgtcctggacatgacggtcgaggaaggtgtggaattc
ttctcggctgtgcctgcggtgcgcgacaagcttcaagcgctgttcgatgtcggcctcggc
tacatcaaggtagggcaacaggccaatacgctgtcgggcggcgaagcccagcgaatcaag
cttgccaaggagctatcaaagaaatcgacgggccgcaccctgtatattctagacgagccg
accaccggcctgcatttccatgacgttgccaaactcttggaaatgcttcaggaactggtc
gatcagggcaactccgtcgtggtcatcgagcacaatctcgaggtcatcaagacagccgat
cacatcatcgatttcggccccgaaggtggcgatggcggcggccagatcgttgcccaaggc
acgccggaagagatcgtcaaagtagaggcttcctataccggccacttcctcagggagttg
ctggagcgccgtccgatgaagaagccgcaagccgcagaatag
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