Allorhizobium ampelinum: Avi_2836
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Entry
Avi_2836 CDS
T00851
Symbol
pcrA
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03420
Nucleotide excision repair
avi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Avi_2836 (pcrA)
03430 Mismatch repair
Avi_2836 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_2836 (pcrA)
Enzymes [BR:
avi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Avi_2836 (pcrA)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Avi_2836 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Avi_2836 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
DUF4420
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACM37043
UniProt:
B9JXR6
LinkDB
All DBs
Position
1:2359507..2362083
Genome browser
AA seq
858 aa
AA seq
DB search
MAFRGRITTLKGMSNGFDDIPFFDEEPAPRTSAKGAKATDAPAPQQESSPAASTKAGGGL
GIAARAMAARDQNRNPDYLAGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILA
TGRAFPSQILSVTFTNKAAREMKERVGVLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGL
TSDFTILDTDDVVRLIKQIIQAEGLDDKRWPAKMFAGMIDGWKNKGLDPAQIPEGDARAF
GNGKGRELYAAYQARLKSLNACDFGDLLLHPIRMFRANPDVLKDYHQRFRYILVDEYQDT
NTAQYMWLRLLAQRPSTKTADGKVTNGTVNICCVGDDDQSIYGWRGAEVDNILRFEKDFP
GAKVIKLERNYRSTEHILGAAGFLIAHNEGRLGKTLFTDRVDPNDEKVVVHAAWDSEEEA
RAVGEEIEQLQRNQHKLNDMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRD
AMAYFRMVCQPADDLAFERIVNTPKRGLGDTTVRTLHDYARKRDIPMLAAASDIIETDEL
KPKARKALFDVVTDFRRWQDLLENTPHTELAEQILDESGYTAMWQNDKSAEAPGRLENLK
ELIRSMEAFESMRSFMEHVSLVMDAETNENLDAVSIMTLHSAKGLEFETVFLPGWEEGLF
PHQRALDEGGRAALEEERRLAYVGLTRAKRRCHLWFVSNRRIHGLWQSTMPSRFLDELPP
AHVEVAEVETSYGGYGRGGYGQSRFDKQEPFTNSYSTPGWKRAQANKTDATRENWGSRSG
HAVERIGYGESGPRGQTIDGQLVAKSTSNEPSKFSVGDRVFHIKFGNGNVSVVEGNKLTI
DFDRAGQKRVLDGFVERA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
ctggcctttcgaggtagaatcactacattgaagggcatgagcaacggttttgacgatatt
cccttctttgacgaagagcctgcaccccggacctccgcaaaaggagcgaaagccacggat
gcgcctgcgccccaacaggagagcagccctgcggcaagcaccaaagctgggggcggattg
ggcatcgcggcgcgtgccatggccgcgcgcgaccagaaccgcaatccagattacctcgca
ggcctcaacccggaacagcgtgaagcagtcgaaaccctggatggtccggttctggtgctg
gcgggtgccggcaccggtaagacgcgagtgttgaccacccgtatcgcccatattctggcc
accggccgcgctttccccagccaaatcctctccgtcaccttcaccaacaaggcggcccgc
gagatgaaagagcgcgtcggcgttctggttggcggtgcagtcgaaggcatgccctggctt
ggcacattccactccatcggcgtcaagctcttgcgccgccatgccgaactggtcggcctg
acctcagatttcactattctcgataccgatgacgtggtgcggctgatcaagcagatcatc
caggccgaagggttggacgacaaacgctggcccgccaagatgtttgccggaatgatcgac
ggctggaaaaacaagggcctcgaccccgcgcagatccccgagggcgacgcccgtgccttt
ggcaatggcaagggccgcgagctttacgccgcctaccaggctcggctgaaaagcctgaat
gcctgcgatttcggcgatcttctcctgcacccgatccggatgttccgcgccaatccggat
gtgctgaaggactatcaccagcgctttcgctatattctggtggatgaatatcaggacacc
aacacggcgcaatatatgtggttgcggctgttggcgcagcggccaagcacaaaaaccgct
gacggcaaggtcacaaacggcacagtgaatatttgctgcgttggcgacgacgatcagtcg
atctatggctggcgtggggccgaagtggacaatatcctgcgcttcgagaaggattttccg
ggcgcgaaagtcatcaaactggagcggaattaccgctcgacggagcatattcttggcgct
gccggttttctgattgcccataacgagggtcgtctgggtaagacgctgtttaccgaccgg
gtcgatccgaacgacgaaaaagtcgtggtgcatgccgcctgggattccgaggaggaagcc
cgcgcggttggcgaggaaatagaacagctgcaacgcaaccagcataagctcaacgacatg
gccattctggtgcgcgcctccttccagatgcgcgagtttgaagaccggttcgtgacgctt
gggctgaactatcgggttatcggcggcccgcgcttttacgagcgattggaaatccgcgat
gccatggcctatttccgcatggtctgccagcccgctgacgacctggccttcgagcggatc
gtcaatacgccaaagcgcggtctgggcgacactacggtgcgcaccctgcatgactatgcc
cgcaaacgagatattccgatgctggcagcggcctccgacatcatcgagaccgatgagctg
aagccgaaggcgcgcaaggcgctgtttgacgtggtgacggatttccgccgctggcaggat
ctgctggaaaacacgccgcataccgagcttgccgaacagatcctcgacgagagcggctat
accgccatgtggcaaaacgacaaatcggcggaagcaccagggcggctggaaaacctgaag
gaactgatccgctcgatggaagccttcgagagcatgcgcagcttcatggagcatgtctcg
ctggtgatggatgccgagaccaacgaaaatctcgacgccgtatcgatcatgacgctgcat
tccgccaaggggctggaatttgagaccgtgttcctgcccggctgggaagaaggcctattt
ccgcatcagcgcgcactggacgaaggcggacgcgccgcgctggaggaagaacggcggctg
gcctatgtcggcctgacgcgggccaagcgccgctgccacctgtggttcgtttccaaccgg
cgcatccatggcctgtggcaatcaaccatgccgtcgcgcttcctggatgaactaccgccc
gcccatgtggaagtggccgaagtggaaaccagctacggcggctatggacgcggcggctac
ggccagtcccgcttcgacaagcaggaaccgttcaccaattcctactccacccccggctgg
aagcgcgcccaggccaacaaaaccgacgccacccgcgaaaactggggcagccgctccggc
cacgcggtggaacgcatcggctacggcgaaagcggcccccgcggccaaaccatcgacggc
cagttggtcgccaaatccaccagcaatgaaccgtcaaagttctccgtcggcgaccgggtt
tttcatatcaaattcggcaacggcaatgtgtctgtcgttgagggaaacaagctgacgatc
gattttgatcgggcggggcaaaagcgggtgctggatgggtttgtggagcgggcttag
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