Allorhizobium ampelinum: Avi_2865
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Entry
Avi_2865 CDS
T00851
Name
(GenBank) DNA polymerase III epsilon subunit-like 3-5 exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03030
DNA replication
avi03430
Mismatch repair
avi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avi_2865
03430 Mismatch repair
Avi_2865
03440 Homologous recombination
Avi_2865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_2865
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_2865
Enzymes [BR:
avi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avi_2865
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Avi_2865
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Avi_2865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACM37063
UniProt:
B9JXT6
LinkDB
All DBs
Position
1:complement(2383359..2383982)
Genome browser
AA seq
207 aa
AA seq
DB search
MSTPLQPKIIAIDFETANEERGSACSVGLAFVENGQVVRVEERLIRPKTMRFSSFNIAIH
GIRPDHVEDAGEFPEVMDEFADDFSGAMVVAHNAAFDLSVWRASCDLYRQPYPSLSYVCS
VKLAQKVWPQLPSHRLNVLAAHLQLSFRHHNAAEDASVCAQAVIAMMERRGAQDLGELAG
MMGISIGRLFPGGYQSCSVRKPARVSA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgccattgcagcccaaaatcatcgcaatcgatttcgagaccgccaatgaagag
cgaggcagcgcctgttcggtcgggctggcctttgtcgagaacgggcaggtggtgcgggtg
gaggagcggttgatccggccaaaaaccatgcggttttcatccttcaacatcgccattcac
gggattcggcctgatcatgtcgaggatgcgggcgagtttcccgaggtgatggacgaattc
gccgatgatttctcgggcgcgatggtggtggcgcataatgccgccttcgatctgtcggtg
tggcgggcgagttgcgatctctatcgccagccctatccaagcctgtcttacgtgtgcagt
gtcaagctggcgcagaaggtctggccgcaattgccctcccatcggctgaatgtgctggcg
gcacatctgcaattgtccttccggcatcacaatgcagccgaagatgcgtcggtttgcgcg
caagcggtgatcgcgatgatggagcgccggggcgcgcaggacctgggcgagcttgctggc
atgatggggatttccatcggacggctgtttccgggtgggtatcaatcctgctcggtgcgc
aagccagcgcgggtttcggcttga
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