Allorhizobium ampelinum: Avi_2893
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Entry
Avi_2893 CDS
T00851
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00470
D-Amino acid metabolism
avi00550
Peptidoglycan biosynthesis
avi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Avi_2893 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Avi_2893 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avi01011
]
Avi_2893 (murD)
Enzymes [BR:
avi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Avi_2893 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
avi01011
]
Precursor biosynthesis
Amino acid ligase
Avi_2893 (murD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
NAD_binding_2
2-Hacid_dh_C
FAD_binding_3
NAD_Gly3P_dh_N
ApbA
KARI_N
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
ACM37086
UniProt:
B9JY56
LinkDB
All DBs
Position
1:complement(2415242..2416657)
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AA seq
471 aa
AA seq
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MIPVSSFSDRSVALFGLGGSGLATARALVAGGAAVTVWDDNPDSVEKARAEGLEARDLRQ
IDWSGLSAFVLSPGVPLTHPKPHWTVDLARAAGVEIIGDIELFVRERQAKAPDCPFIAIT
GTNGKSTTTALIGHILRHNGYDVQIGGNIGTAVLTLEPPAPDRYYVVECSSYQIDLAPGI
DPTAGILLNLTPDHLDRHGSMENYAAVKERLVSGSDVAIIGVDDDYCLEIAKRLEEAGKE
VVRISKGQPLTDGLYNDGQRIVRGSGGAAEVIADLNGIATLRGSHNAQNAAAAIAACMAV
GLSKDQIQAGLSSFAGLKHRMQPVGRRGHVVFVNDSKATNAEASAPALSSYERIYWIAGG
LPKQGGIASLSPLFPRIAKAYLIGEAASGFAATLGNAVAYEISGTLDRALAHASADAQDD
GNGGEVAVMLSPACASFDQYKNFEVRGEAFVSLVAGLDDVTMLIQQASGET
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtttcaagcttttccgatcgcagcgtcgccctgttcgggcttggcggctcc
ggccttgccacggcgcgcgccctggtggccgggggtgcggcggtgacggtctgggatgac
aatcctgacagcgttgagaaagcgcgggcagaagggctggaggcacgggatctacgccag
atcgactggagcgggctttccgcctttgttttgtcgccgggcgtgccgctgacccatccc
aagccgcattggacggtggatctggcaagggcagcaggcgtcgagatcatcggcgatatc
gagcttttcgtgcgcgagcggcaggcgaaagccccggattgcccgttcatcgccattacc
ggcaccaatggcaaatcgaccaccacggcgctgattggccatattctgcgccacaacggt
tatgatgtgcagatcggcggcaatatcggcacggcggtgctgaccctggagccgcccgcg
cctgatcgttattatgtagtggaatgctcatcctaccagattgatcttgcccccggcatt
gatccaacggcaggcattctcctgaacctcacccccgaccatctcgaccgccatggcagc
atggaaaattatgcggctgtgaaggagcggttggtctcaggcagtgatgtggcgatcatc
ggcgtcgatgacgactattgccttgagatcgccaagcgtttggaagaggcgggcaaagag
gtcgtgcggatttccaagggccagcctttgaccgacggtctttacaatgacggccagcgg
attgtgcgtggctctggtggagccgccgaggtgattgccgacctgaacgggatcgccacg
ctgcgtggcagccacaatgctcagaacgcggcagcggccattgccgcttgtatggcggtg
ggattgtccaaagaccagattcaggccggattgtcctcctttgcagggttgaagcaccgg
atgcagccggttgggcggcggggacatgtggtctttgtcaatgacagcaaggcgaccaat
gccgaggcgtctgcaccggccttgtccagttatgagcggatctactggattgctggcggc
ctgcccaagcagggtggcattgccagcctttcgccgctgtttccgcgcattgccaaggcc
tatctgatcggcgaggcagcgtccggctttgcggctacgcttggcaatgccgttgcttac
gagatttccggtacgctggaccgggcgcttgcccatgccagcgccgatgcgcaagacgat
gggaatggcggcgaggttgccgtgatgctttccccggcttgcgcaagcttcgaccagtac
aagaattttgaagtcaggggcgaagccttcgtttcgctggtagccgggcttgacgatgtg
acgatgctgatccaacaggcttcaggagagacatga
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