Allorhizobium ampelinum: Avi_3376
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Entry
Avi_3376 CDS
T00851
Name
(GenBank) polymerase epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03030
DNA replication
avi03430
Mismatch repair
avi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avi_3376
03430 Mismatch repair
Avi_3376
03440 Homologous recombination
Avi_3376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_3376
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_3376
Enzymes [BR:
avi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avi_3376
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Avi_3376
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Avi_3376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACM37418
UniProt:
B9JZV8
LinkDB
All DBs
Position
1:complement(2794472..2795452)
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AA seq
326 aa
AA seq
DB search
MTEQFDMFSGEVSRDRLAVRAKSRPVKPEQLVASMSEEEMVRHLSETGRYRILTKLMPRE
VVPFPRPEFPLKGIILDTETTGLNWRKDEIIEIGLIAFTFDSNGNIGDVTEVYGGLQQPS
MSIPADITTLTGITDEVVAGQSIDMEVVQALIEPADLVIAHNAGFDRPFCEMLSPMFAGK
AWACSNAEIDWSSRGYEGTKLGYLIGQAGFFHEGHRAVDDCFALLEVLARDNDGTASTAF
AELYQASQRSRVRILAENSPFDMKDHLKARGYRWSDGSDGRPKSWWIEVDEQALDEELSY
LRTEIYRYPEADPPIKRLTAFDRFRA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacagtttgacatgttttcgggagaggtttcgcgcgatcggctcgctgttcgt
gccaaatcaagacccgtgaagcctgagcagctggtcgcttccatgagtgaagaggagatg
gttcgccatttgtcggagacgggccgctaccgcatcctcacaaaacttatgccgcgggag
gtcgtaccgttcccacgcccggaattcccgctcaaaggcatcatcctcgacaccgagacc
acgggcttgaattggcgcaaggatgagatcatcgagatcgggctgatcgcgttcactttc
gattccaatggaaacatcggtgacgtgaccgaggtctatggcgggcttcagcagccaagc
atgtctattcccgctgacatcacgacgctcaccggcatcaccgacgaggtggtcgccggt
caatcgatcgatatggaggtcgtccaggccctgatcgaacccgcggatttggtgatcgcc
cacaatgccggttttgaccgtccattctgcgagatgttgtctccgatgtttgcgggcaag
gcctgggcctgctcgaatgctgagatcgattggtcgtcacggggatatgaaggcaccaag
cttggctatctcatcgggcaggcgggtttcttccacgagggccatcgtgcggttgacgat
tgtttcgcgctcctggaggttctcgcaagggacaatgatggaacggcctccaccgctttt
gctgaactctatcaagcaagccagcgatcgcgtgtccggatccttgccgagaatagcccc
tttgacatgaaggaccacctgaaagcgagaggctatcgttggtctgacggaagcgacggt
cgtccgaaatcctggtggatcgaagtcgatgaacaggcgctagacgaggaactctcatac
ctgcgaaccgaaatctaccgctatcccgaggcagatccaccgatcaaacgcctgactgcc
ttcgaccgttttagggcttga
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