Allorhizobium ampelinum: Avi_3699
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Entry
Avi_3699 CDS
T00851
Name
(GenBank) sigma 54 dependent transcriptional activator
Organism
avi
Allorhizobium ampelinum
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
HTH_50
HTH_7
AAA
Mg_chelatase
HTH_22
AAA_7
HTH_23
Phage_AlpA
AAA_3
RWP-RK
AAA_22
HTH_29
HTH_28
HTH_Tnp_1_2
dnstrm_HI1420
AAA_2
TetR_N
Phage_CP76
HTH_17
MCM
DUF7160
Motif
Other DBs
NCBI-ProteinID:
ACM37660
UniProt:
B9JS32
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Position
1:complement(3064108..3065427)
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AA seq
439 aa
AA seq
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MPVIVQTGQGGIDTVVQAMRAGAFDFVVKPVSPERIASAIGNALRVDQRDAKSRPARRSR
TGAVHFSDIISASPAMTRVIDLSRRAAQSNIPVVLEGESGVGKEMVARAIQSGSDRASRP
FVTVNCAAIPANMVESILFGHEKGSFPGATERHIGKFAEADGGTLFLDEIGELPLDTQVK
LLRAVQEGEIEVIGARQTQKVNVRLISATNKDLIEEVKAGRFREDLYYRLNVFPITIPAL
RRRKEDIPFLARAFTERFSAEQRLTRTLSLGAGALALLTAFDWPGNIRQLENAIYRAVIL
AEGTDLTESDFPQILAQIPGGLAQDKFWSGLPGTAESQPEQVAPRGADRPELAFIDRLPA
PRAEDPRPVALDNVIVSIDESGNVRQLAEIEEELIRFALKFYRGQMSQVARKLGIGRSTL
YRKLKDYGIDPDNPQKHAA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgtcatcgtgcagaccggtcagggcggcatcgataccgtggtgcaggccatgcgg
gctggcgccttcgatttcgtcgtcaagccggtctcgccggagcgaatcgcatcggccatc
ggcaatgcgctacgcgtcgaccagcgcgacgccaagtcgcgtcctgcacgccggtcacgc
accggggcggtgcatttctccgatatcatttcggcaagtccggccatgacccgggtcatc
gacctgtcgcgccgtgcggcccaatcgaatatccctgtcgtgctggaaggcgaatcgggc
gttggcaaggaaatggtcgcccgggctatccagtcgggcagcgaccgtgcgtcgcggcct
tttgtcacggtcaattgcgctgccattcccgccaatatggtggaaagcattctgttcggc
catgaaaagggatctttccccggtgccacggaacgccatatcggcaagttcgccgaggct
gacggcggcacgctgttcctcgatgagatcggcgaattgccgctcgatacccaggtgaag
ctgctgcgggccgtgcaggaaggcgaaatcgaggttatcggcgcccgccagacccagaag
gtcaatgtgcggctaatctcggcgaccaacaaggacctgatcgaagaggtcaaggctggc
cggttccgcgaggacctttattaccgcctcaacgtcttccccatcaccattccggctctg
cgccgccgcaaggaggacattcccttcctggcgcgcgcctttaccgaacggttctcggca
gagcagcgtctgacccggaccctgtctctgggggctggcgcacttgcattgctgacggcc
ttcgattggcccggcaatattcgccagctggaaaatgccatctaccgggcggtgattctt
gccgaaggtacggatctgacggaaagcgatttcccgcagatcctggcacagatcccaggc
ggtttggcgcaggacaagttctggtcgggtctgcctggcacggccgaaagccagccggaa
caggtggcgccgcgcggtgcagaccggccggaactggcctttatcgaccggctacctgcc
ccccgcgccgaggacccgcgtccggtggcgttggacaatgtcatcgtcagcatcgacgag
agcggcaatgtccggcaattggctgagatcgaggaagaactgattcgtttcgcgctgaaa
ttctaccgaggccagatgagccaggtggcacgcaagcttggaatcggtcgctcaacactc
tatcgcaaactgaaggattacgggatcgacccggataatccgcagaagcacgccgcctga
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