Allorhizobium ampelinum: Avi_3856
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Entry
Avi_3856 CDS
T00851
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Avi_3856 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avi01007
]
Avi_3856 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avi03016
]
Avi_3856 (lysS)
Enzymes [BR:
avi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Avi_3856 (lysS)
Amino acid related enzymes [BR:
avi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Avi_3856 (lysS)
Transfer RNA biogenesis [BR:
avi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Avi_3856 (lysS)
Prokaryotic type
Other AARSs
Avi_3856 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ACM37777
UniProt:
B9JST4
LinkDB
All DBs
Position
1:complement(3202419..3203915)
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AA seq
498 aa
AA seq
DB search
MTEANTETALSSDATEVRRQKLALLRQQIGDVYPAHFHRTATTAELAEKYAELEPDTESG
DTVTVAGRIYSSRNSGMFMDLRDASGKIQIFSHKDMTPEEARAMLPMIDLGDIVGVTGPV
RRTKRGELTINAETITMLTKTLLPMPEKYHGVTDIEVRYRKRHLDILTNDESKLRFQQRS
KIVSGIRRFMESDGFMEVETPMLQSVYGGASADPFKTHHNTLKQDMYLRIAPELFLKRTL
VSGLADKIFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDVMDLVERLFADLAMRIHG
STEFAFGDKEISFKGPFKRVPMPDAVKEVTGIDFLAIKTDEEARAAAKAAGFAVEKDWTW
GECLSFIFEEKVEGTLIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWEIGNAFS
ELNDPEEQRKRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTN
APSIRDIILFPARRAKVD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcaaacaccgaaaccgccctttcctccgacgccaccgaggtgcgccgccag
aaactggcgctgctgcgccagcagatcggcgatgtctatccagctcacttccaccgcacc
gccaccacggctgaactggccgaaaaatatgcggagctggagccggacacggaatcgggc
gatacggttacggttgcaggccgcatttattcctcgcgcaattccggcatgttcatggac
ctgcgcgatgcctcgggcaaaatccagatcttcagccacaaggatatgaccccggaagaa
gcgcgcgccatgctgccgatgatcgatctgggcgatattgttggcgttaccggtccggtt
cgccgcaccaagcgcggtgagctgaccatcaacgccgaaaccatcaccatgctgaccaag
acgcttctgccgatgccggagaaatatcacggcgtgacggatatcgaagtgcgctatcgc
aagcgccatctcgacattctcaccaatgacgaatccaagctgcgcttccagcagcgctcg
aagatcgtttccggcatccgccgtttcatggaaagcgatggcttcatggaggtggaaacc
cccatgctgcaatccgtctatggcggagcgtctgccgatccgttcaagacccatcacaac
acgctgaagcaggacatgtatctgcgcattgcgccagaactgttcctcaagcgcacgctg
gtctctggtcttgccgacaagattttcgaaatcaaccgcaacttccgcaatgaaggcgtg
tccacccggcacaatcctgaattcaccatgatggaatgctactgggcctatgccgactac
gaagacgtgatggatctggtcgagcgcctgtttgccgacctcgccatgcgcattcatggc
tcgaccgaatttgcctttggcgacaaggaaatctccttcaaaggtccgttcaagcgcgtg
cctatgccggatgccgtcaaggaggtcacgggcatcgacttcctggccatcaagaccgat
gaagaagcccgcgcggcggccaaggctgccgggtttgcggtcgagaaggattggacctgg
ggcgaatgtctgtccttcatctttgaagaaaaggtcgagggcacgctgatccagccaagc
catgtgacgcatttccccaaggacatttcgccgtttgccaaggaagtgcccggcgagccg
cgtctggtcgaacggtttgagacctattgcaacgcctgggaaatcggcaatgcgttttcc
gagctgaacgatccggaagaacagcgcaagcgcatggtcgagcagctcgaacaggcccat
gcccgtggcgaaaaggacaagcagttggacgacgaatttctcgacgccatcgaccagggc
atgccgccagccggtggacttggcattggcgtcgatcgcctgatcatgctgctgaccaat
gcgccgtcgatccgagacatcattctgttcccggcgcggcgcgccaaggtcgattga
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