Allorhizobium ampelinum: Avi_4002
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Entry
Avi_4002 CDS
T00851
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Avi_4002 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_4002 (alkA)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Avi_4002 (alkA)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Avi_4002 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACM37889
UniProt:
B9JTI1
LinkDB
All DBs
Position
1:complement(3371253..3371906)
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AA seq
217 aa
AA seq
DB search
MAEMMRIRNQADLATGLEALLDIDPRLHAIAREAGPLPLRLTEPGFEGLAFIIVSQMVSR
ASADAIWRRLCEAMGTAEPAAYLALGDAALSLGLSRAKHACLSGLASAVQAGDIDLFAIL
DQPVETGIAELTRLRGIGLWTSEVYLMFCGGHADVFPAGDVALRAAVGDGLCLATRPDIR
ETTRIALTWRPYRAIAARLFWAFYAARLRREAAPVPV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgatgcgaattcgcaaccaagcggatcttgccaccggccttgaggccttg
ctggatatcgatccccggctgcatgccattgcccgcgaggccggacccttgccgcttcgg
ttgacggaaccgggtttcgaagggctggccttcatcatcgtctcgcaaatggtgtcacgc
gccagtgctgatgcgatttggcggcggctgtgtgaggcgatgggaacagccgaacccgcc
gcctatttggcgctgggtgacgcagcgctttcgctcggtctttcgcgcgccaagcatgcc
tgcctgagcggtttggcctctgctgtccaggctggtgacatcgatctcttcgccatcctc
gatcagccggtggagaccggtattgccgagctgacccggctgcgtggcattgggctgtgg
acatcggaagtttatctgatgttttgtggcggtcacgcagatgtgtttccggcaggtgac
gtggcactgcgggcggctgtgggagatggcctttgccttgccacgcgcccggacatccgc
gaaaccacccgaattgcactgacctggcggccataccgcgccattgcggcacggttgttc
tgggccttttatgcggcgcgtttacgacgcgaagcagcgccggtgccggtctga
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