Allorhizobium ampelinum: Avi_4112
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Entry
Avi_4112 CDS
T00851
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Avi_4112 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_4112 (priA)
Enzymes [BR:
avi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Avi_4112 (priA)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Avi_4112 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_16
AAA_30
Zn_ribbon_Com
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ACM37975
UniProt:
B9JTR7
LinkDB
All DBs
Position
1:complement(3465167..3467386)
Genome browser
AA seq
739 aa
AA seq
DB search
MSTESSDLFGPRAKAGPARRAVPVLVPLPAPGPYSYAVPDEMMLTPGAIVQVPLGPRKVV
GVVWDGEGDGAKVDPAKLRSIEKLFDCPPLDVGMRRFIDWVAAYTLSPPGLVARMALRAP
AAFDPDPMIEGLRYSGHAPEKLTPARRKVLELAEDGLSWTKSGLAHAAGVSTSVVDGMAK
LGLFETVFLPPPPLVALPDPDYAAHRLSGPQLGAAEVLVESVRDGGFSVALIDGVTGSGK
TEVYFEAIAETLRQGRQVLILLPEIALTTAFLERFQDRFGAKPGEWHSDLATRTREKVWR
QTATGDIRVVAGARSALFLPFADLGLIIVDEEHDPAFKQEDRVFYNARDMAVVRARIASI
PAVLVSATPSVESQVNSYSGRYKRIHLPTRFADAAMPDLHLVDMRRHPPERGGFLSPLML
RAIGKTVEKQQQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRGQIQCHQCGY
AEPTPNACPECGTLDHLVACGPGVERIAEEVERHFPDARTLVLSSDLGGVKRLRLELEAI
AKGEADIVIGTQLVAKGHNFPLMTLVGIVDADIGLANGDPRAAERTFQLLSQVTGRAGRT
GLKSHGLLQTYQPQHPVMQAIVSGDADAFYEREITERERAVLPPYGRLVSIIVSADNRAD
AETHARQLRQAAPAVGGIAILGPAEAPLALIRGRHRFRLLIHGRKASDMQAFVAAMLGNG
PKERRSIQVQVDVDPQSFL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaatcgtcagatctgtttggtccgcgcgccaaggccggtcctgcccgccgc
gccgtccccgtcctggtgcccttgccggcaccggggccttacagttacgccgttcccgat
gagatgatgctgacgccgggcgccatcgtgcaagtgccgcttgggccccgcaaagtggtc
ggcgttgtctgggatggcgagggtgacggggccaaggtcgatcccgccaaactgcgcagc
atcgaaaagctgttcgattgccctccgctggacgtgggcatgcgccggttcatcgactgg
gtggcggcctatactctttctccccccggattggtggctcgcatggccttgcgtgcgcct
gccgctttcgatccggacccgatgatcgaaggcttgcgctacagcggtcatgccccggaa
aaactgaccccggcccgcaggaaagtgctggaattggccgaggacgggctttcctggacc
aagagcgggcttgcgcatgcagcaggggtctcgacctcggttgttgacggcatggcaaag
ctcggcctgttcgaaaccgtatttctaccgcctccacccttggtggcgctgccggacccg
gattacgccgcccatcgtctctccggtccgcagctgggcgcagctgaggtgctggtggag
agtgttcgggatggcgggttttcggtggcgctgatcgatggcgtcacaggatccggcaag
acggaagtctatttcgaagcgattgccgaaaccctgcgccagggccgccaggtgctgatc
cttctaccggaaatcgcgctgaccaccgcttttctggagcggtttcaggaccgttttggt
gccaagcccggcgaatggcattccgaccttgccacccggacgcgggaaaaagtctggcgc
caaacggcgacaggcgatattcgggtggttgccggtgcgcgctcggcgctttttctaccc
tttgccgatctggggctgatcattgtcgatgaggagcatgatccggccttcaagcaggaa
gacagggtgttctacaatgccagggacatggcagtggtgcgggcgcggattgccagcatt
cctgctgtgctggtgtcggccacgccgtcggttgaaagtcaggtcaacagttatagcggt
cgctacaagcgtattcacctgccgacccgttttgccgatgcggcgatgccggatctgcat
cttgtcgacatgcgccgccatccgccggaacggggcgggtttctttcgcctctcatgctg
cgggccatcggcaagacggtggaaaagcagcaacaggcactgttgtttctcaatcggcgg
ggctatgcgccgctgacgctctgccgggtctgtggccatcgtttccaatgcccgcaatgt
tccagttggctggtggaacaccggtttcgcggccagattcaatgccatcaatgcggttat
gccgagccgacgcccaatgcctgccccgaatgcgggacgctggaccatctcgttgcctgc
gggccgggcgtggagcggattgccgaggaggtggagcggcacttcccagacgctcgcacg
ctggtcttgtcgtcggatctcggcggcgtcaaacggctcaggctggaactggaagccatt
gccaagggcgaggcggatatcgtcatcggcacgcaattggtggccaaggggcataatttt
ccgctgatgacgcttgtcggtatcgttgatgccgatatcggcctggccaatggtgatcca
cgcgccgccgagcgcacctttcaactgttgagccaggtgacgggtcgggcagggcgtacc
ggtttgaagagtcatggcctattgcagacctatcagccgcagcatccggtgatgcaagcc
attgtttccggtgatgccgatgcgttttacgagcgggaaattaccgagcgggagcgggcg
gtgctgccgccttacggacggcttgtctcgatcatcgtgtcggcggacaacagggcggat
gccgaaacccatgcccggcaattgcgccaggccgcccctgctgtcggcggcatcgccatt
ctggggcctgccgaggcaccgctggcgttgatccgtggccgccatcgtttcagactgctc
attcatggccgtaaagccagcgacatgcaggctttcgttgctgcgatgctgggcaacggc
ccgaaagagcgtcgctccatccaggtgcaagtggatgtcgatccgcagagctttctttga
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