Allorhizobium ampelinum: Avi_4114
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Entry
Avi_4114 CDS
T00851
Symbol
xerC
Name
(GenBank) site-specific tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avi03036
]
Avi_4114 (xerC)
Chromosome and associated proteins [BR:
avi03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Avi_4114 (xerC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_2
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
ACM37977
UniProt:
B9JTR9
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All DBs
Position
1:3470135..3471103
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AA seq
322 aa
AA seq
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MYKTINHEGPAVTELLLIAAPDLMAERQNWLASLSGQRRLADHTLTAYERDTRQFLGFLT
GYFGGPPSIDDIKALRPSDLRAFLSSRRKEGAGARSLGRHLAGVRSLLRYLERKGLVNAA
GAGAIRSPKQPKSLPKPLSAAQALTVVAAETQLNEEPWIAARDAAVFALLYGCGLRISEA
LDLTPADIVATTTTLRVTGKGNKTRLVPLLPIVRQAVESYQSLCPYHLPATEPLFRGARG
GKLQQGIIQREMQRLRSALGLPDTATPHALRHSFATHLLSGGGDLRTIQELLGHASLSTT
QIYTGVDSARLLDVYDRAHPRA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ctgtataagacgatcaatcacgaaggccctgccgtgacagaattgctgttgattgccgcc
cccgacctgatggcggaacgccagaattggcttgcgagcctgtctggacaaaggcggctc
gctgatcatacgttgaccgcctatgaacgcgatacccgtcagtttctcggatttctgacc
ggttatttcggcggtcctccgtcaatcgatgatatcaaggcgttacgaccttccgacctg
cgcgcatttttgtcgtcgcgccgcaaggaaggtgctggcgcgcgctcgctcgggcgccat
ctcgccggtgtccggtcgctcttgcgctatctggagcgcaagggcctggtcaatgctgcc
ggtgccggtgccatccgctcacccaagcagccgaaatcgctgccgaagccgctcagtgcc
gcccaggctttgacggtggtggccgcggaaacacaattgaacgaggagccttggatcgcg
gcgcgggacgctgcggtttttgctttgctctatggctgcggcctgcgcatttccgaggcg
ctggacctgacacccgccgatatcgtcgccacgacgacaacactacgggtgaccggcaag
ggcaacaagacccggctcgtgccgctcttgcccattgtgcggcaagcggttgaatcctat
caaagcctctgcccctatcacctcccagccacagagccgctgtttcgcggggcgcgcggc
gggaaattgcagcaaggcatcatccagcgggaaatgcagcgcttgcgctcggcactcggc
ctgccggataccgcaacgccacatgcattgcgccattcctttgccacgcatctgctgagc
ggcggcggcgacctgcgcaccattcaggaattgcttggccatgccagcctctccaccacc
cagatctataccggcgtggattcggcacggctgttggatgtgtatgaccgggcgcatccc
cgcgcgtga
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