Allorhizobium ampelinum: Avi_4203
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Entry
Avi_4203 CDS
T00851
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi02024
Quorum sensing
avi03060
Protein export
avi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Avi_4203 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Avi_4203 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Avi_4203 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avi02044
]
Avi_4203 (ffh)
Enzymes [BR:
avi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Avi_4203 (ffh)
Secretion system [BR:
avi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Avi_4203 (ffh)
Eukaryotic Sec-SRP protein
Avi_4203 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_30
AAA_22
AAA_19
AAA
AAA_14
AAA_31
APS_kinase
6PF2K
AAA_18
Thymidylate_kin
AAA_16
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ACM38045
UniProt:
B9JUC2
LinkDB
All DBs
Position
1:3538680..3540260
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AA seq
526 aa
AA seq
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MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALEVVRSFTDKVREKAV
GAAVLKAIKPGQMVVKIVHDELVDMLGAEGVSIDLHAPAPVVIMMVGLQGSGKTTTTGKI
AKRLTDRDRKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIVGQSPTDIASRAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKNAKPHEILLVADALTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMTELDEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKAAAMAAKMAKGKFDLDDLADQLRQMQKMGGMGGIMGLMPGMAGMK
DKMAASGMDDKMFGRQIAIISSMTKAERTNPDILKHSRKKRIAKGSGTDASEINKLLKMH
RQMADMMKMMGGKKGGGMMKQLMGGLAGKMGMGGMGGMGGMGGMPDLSSMDPKQLEALAR
QAEAAGIKPPPGLGGSMGGGLPGLGGGKLPGLGGGFPGLPGLPKKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctgcaggaccgccttggctccatcttgaatggactgaccggccgtggc
gcgttgtcggaagccgatgtttccgccgccctgcgggaggttcgccgcgccctgctggaa
gccgacgtcgccttggaagtggtgcgcagctttaccgacaaggtgcgggaaaaggcggtt
ggtgccgccgttctgaaagccatcaagcccggccagatggtcgtcaagatcgtccatgac
gaattggtcgacatgctgggcgcagaaggcgtctccatcgacctgcacgcaccggccccg
gttgtcatcatgatggtcggcctccaaggctcgggcaagaccacgacgaccggcaagatc
gccaagcggttgaccgaccgcgatcgcaaaaaggtcctgatggcctcgctggacacccgc
cgtcccgccgcccaggaacaattgcggcaattgggcgtgcagaccggcgtcgatacgctg
ccgatcattgtaggccagtcgccgaccgatattgccagccgcgccgtgcaggcggccaag
ctcggcggccatgacgtcgtcatcctcgataccgcaggccgtacgcatatcgacgagccc
ttgatggtcgaaatggccgacatcaagaagaatgccaagccgcacgaaattctgctggtt
gccgatgcgctgaccggtcaggacgccgtcaatctcgcccgcaatttcgatgagcgcgtc
ggcattaccggcctggtcctgacccgtatggacggcgatggccgtggcggcgcggccctg
tccatgcgcgccgtcaccggcaagccgatcaagctgatcggcgtcggcgaaaagatgacg
gaactggacgagttccatccgcgccggattgccgaccgcattctcggcatgggcgatatc
gtttcgctggtcgaaaaggccgctgaaaatattgacgccgaaaaggccgccgccatggcc
gccaagatggccaagggcaagttcgatctcgacgacctcgccgaccagctgcgccagatg
cagaaaatgggcggcatgggcggcattatgggcctgatgcccggcatggccggaatgaag
gacaagatggccgcctcaggcatggacgacaagatgttcggtcgccagatcgccatcatc
tcgtcgatgaccaaggccgagcgcaccaatcccgacattctcaagcattcccgcaagaag
cgcattgccaagggctccggcaccgatgcgtccgagatcaacaagcttttgaaaatgcac
cgccagatggccgacatgatgaaaatgatgggcggcaagaagggcggcggcatgatgaag
cagctgatgggcggtctggccggcaaaatgggcatgggtggaatgggcgggatgggcggg
atgggtggcatgccggatctcagctccatggaccccaagcagctggaagcgctggcacgc
caggctgaagccgccggtatcaagccgcctccgggcctgggtggtagcatgggtggcggg
cttcccggcctgggtggtggaaaattgcctggacttggtggaggctttcccggccttccc
ggtctcccaaagaagaagtga
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