Allorhizobium ampelinum: Avi_4270
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Entry
Avi_4270 CDS
T00851
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avi03021
]
Avi_4270 (rpoH)
Transcription machinery [BR:
avi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Avi_4270 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
KORA
HTH_10
FAZ1_cons
GerE
Motif
Other DBs
NCBI-ProteinID:
ACM38093
UniProt:
B9JUH0
LinkDB
All DBs
Position
1:complement(3590202..3591059)
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AA seq
285 aa
AA seq
DB search
MNSLQADKKLIRIAMAAPYLERQEEHDLAVRWKHGNDQVARNQIAHAHMRLVIAMASKFR
GFGLPLGDLIQEGYIGLLEAAARFEPTRDVRFSTYAGWWIRASMQDYILRNWSIVRGGTS
SSQKALFFNLRRLRAKLAQGDQRLTDQAIHQEIATALGVSLADVQSMDARLSSNDTSLQA
PISNNGEEGAERLDMLASDEPTPDEQVTDMIDTERRLDWLRGAMAHLNEREMRIIRARRL
SEDGATLEELGCELGISKERVRQIETRAMEKLKVALVQANPQMVA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaattccctgcaggccgataagaagctcatcaggattgcaatggccgcaccgtatctg
gagcgccaggaggagcatgatctggcggtacgctggaaacatggcaacgatcaggtggcc
cgaaaccagattgcccatgcccatatgcggctggtgattgccatggcttccaagttccgt
ggcttcggcctaccgctcggcgatctcattcaagaaggctatatagggctgctggaagct
gcggcaaggtttgagccgacccgtgatgtgcgtttttcgacctatgccggttggtggatt
cgcgcctccatgcaggattatatcctgcgcaactggtccatcgtgcgcggcggcaccagt
tcctcccagaaggcgttgtttttcaatctacgccggttgcgggcaaagcttgcccagggc
gatcaacgcttgaccgatcaggctatccaccaggaaattgccaccgcgcttggtgtcagc
cttgccgatgtccagtcgatggacgcccggctctcttccaatgatacctccctgcaagca
ccgatttccaacaatggtgaagagggtgccgaacggctggatatgctggccagcgatgag
ccgacaccggacgagcaggtgacggatatgatcgataccgagcgtcgcctggattggctg
cgcggcgccatggcccatctgaatgagcgtgaaatgcgcatcattcgcgcccggcgactt
tcggaggacggtgcaacgcttgaggagctgggctgtgagcttggtatttccaaggagcgg
gtgcgccagatcgagacccgggcgatggaaaagctgaaggtcgcgctggttcaggccaat
ccacagatggtggcctga
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