Allorhizobium ampelinum: Avi_4384
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Entry
Avi_4384 CDS
T00851
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
avi
Allorhizobium ampelinum
Pathway
avi03030
DNA replication
avi03430
Mismatch repair
avi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avi_4384 (holA)
03430 Mismatch repair
Avi_4384 (holA)
03440 Homologous recombination
Avi_4384 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avi03032
]
Avi_4384 (holA)
03400 DNA repair and recombination proteins [BR:
avi03400
]
Avi_4384 (holA)
Enzymes [BR:
avi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avi_4384 (holA)
DNA replication proteins [BR:
avi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Avi_4384 (holA)
DNA repair and recombination proteins [BR:
avi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Avi_4384 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HK_RR_C
CaM_bind
Motif
Other DBs
NCBI-ProteinID:
ACM38186
UniProt:
B9JV48
LinkDB
All DBs
Position
1:3716198..3717241
Genome browser
AA seq
347 aa
AA seq
DB search
MVEVKSHEFDGFLQKSVRHYKMFLVYGPDVGLVAERAAALAKSTGVALDDPFSVIRLDSG
DLQSDPGKLLDEMNALGLFGGDRLVWIRGIANEKSVVDGLQILAKDPPDSSCLILEAGDL
KKGSATRKIAEPARNIAVIPCYQDDARAINALIDAEFSAAVKRLTPAARSLLSESLGGDR
RASRNEISKLLLYCLHDDLVDETHVEQIIGDASAVSTDEAVDAVLAGNSDALLHAVQKIA
TSKTPMFLVLQGCLRQFQLLDIMRSEMDEKRQQAGQVMQTLGRQVHFKRKPLFEKSLKNW
PSDALSVEMRRLQAAILASRRQPSLEDSLSLQTLLAITLQSARRSRQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagtcaagtcacacgaattcgatggctttctgcaaaaatcagtccgccactac
aagatgtttctggtctatggcccggatgttggccttgtggcggagcgcgcggcagccctt
gccaaatcgactggcgttgcgcttgacgatcccttctcggtcattcggctggatagcggc
gacctgcagagcgatccgggaaaactattggatgaaatgaacgccctcggcctattcggc
ggtgataggcttgtctggatccgtggtatcgccaatgaaaagagtgtggtcgatgggctg
caaattcttgcgaaggatccgccagactccagttgtctcatcttggaggctggggatctc
aaaaagggatcagcgacccggaaaatagccgagccagcccgcaatatcgcagttattccc
tgctatcaggacgatgcacgcgccatcaatgccttgattgacgcggaattcagcgccgca
gtaaagagactgacgcctgcggctcgttcactgctcagtgaaagtctaggcggtgaccgc
cgcgcatctcgcaatgagatatccaagctgctgctctattgtctgcatgacgatctcgtc
gatgaaacccatgtcgagcagattattggcgatgccagcgccgtttcgacggacgaagcg
gtagatgccgtgcttgctggcaattccgacgccctcttgcatgccgtccagaaaattgcc
acctccaaaacaccgatgttcctcgttcttcaggggtgccttcgacagtttcaattgctg
gacattatgcgaagtgagatggatgaaaaacgccaacaggctggccaagtcatgcaaacg
cttggccgtcaggtacatttcaagcgaaagccactgtttgaaaaatctttaaagaattgg
ccgtccgacgccctttcagtcgagatgcgccgattacaggcagctattctcgccagcaga
cgtcagccatctttagaagacagcctgtcgcttcaaacccttctggctattaccctgcaa
tcggcaaggagaagccgccagtaa
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