Allorhizobium ampelinum: Avi_5339
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Entry
Avi_5339 CDS
T00851
Symbol
rbsB
Name
(GenBank) ABC transporter substrate binding protein (ribose)
KO
K10439
ribose transport system substrate-binding protein
Organism
avi
Allorhizobium ampelinum
Pathway
avi02010
ABC transporters
avi02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Avi_5339 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Avi_5339 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avi02000
]
Avi_5339 (rbsB)
Transporters [BR:
avi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Avi_5339 (rbsB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ManC_GMP_beta-helix
Motif
Other DBs
NCBI-ProteinID:
ACM38480
UniProt:
B9K0T2
Structure
PDB
PDBj
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All DBs
Position
2:340737..341726
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AA seq
329 aa
AA seq
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MERRRFLQSATALALSAPAVLAVTRAQAENKKFRIALIPGLTTDAFYITMHKGAEAAAAA
IGAQIIFQGAPDFNPVTQVPVLDAVIAKKPDAILIAPTDTTQLVQPLKKAADAGIPMITV
DTFIGTGDYQTGAGDGDFPLSYIASDNVLGGEIAARSLALAIGDKGKVYVSNVKPGVSTT
DQREQGFKSEMAKHPGITVLETQFNDNDANKAASQLQAVYARNPDLAGVFGANLFSGLGS
ANGVQQAGQSGTIKVVAFDAPGSVVDNLKSGLIDFAIAQHPAEIGYYGVISAYAHLTGQS
IPTKIGTGFTVINKSNVTDPAVARFIYAE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtcggcgttttcttcaatctgcgaccgcgcttgccttgtccgcaccggctgtt
ctggcggttacgcgtgctcaggccgaaaataaaaaattcagaattgcgctgattccgggt
ctgacgaccgatgcgttttatatcacgatgcataagggcgcagaagcagcagcagctgcc
attggcgcacagattatttttcaaggcgctccagatttcaaccctgttacacaggtcccg
gttcttgatgcggtcattgcgaaaaagccggatgccattctcatcgcacccaccgatacc
acccagctggtgcagccgttgaaaaaggccgcggatgcgggcattccaatgatcacggtc
gatacattcatcgggacaggtgactatcaaacgggtgcaggggacggggactttccgttg
tcctatatcgcatcggacaatgttctgggcggcgaaattgcagcgcgctctctggcgttg
gccattggtgacaaaggcaaggtctatgtctccaacgttaagccaggagtttcgacaacg
gaccagcgagagcaagggttcaaatccgagatggccaaacatcccggcattacggttctc
gaaacgcaattcaatgacaatgacgccaacaaggccgcatctcaactccaggcggtctac
gcccgcaatccagatttggccggggtatttggtgccaatctgttttccgggcttggatcg
gcgaacggtgtccagcaggctggccaatccggtacaatcaaggttgtggctttcgatgcg
ccagggtcagtggtggataatctgaaatccggccttatcgattttgcaatcgcccagcat
cctgcggaaatcggctattacggggtgatctccgcctatgcgcacctgaccgggcagtcc
atcccaaccaagattgggactggctttactgtcatcaacaaaagcaacgtgactgatcca
gccgtcgctcggttcatctacgctgaatag
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