Allorhizobium ampelinum: Avi_5512
Help
Entry
Avi_5512 CDS
T00851
Name
(GenBank) ABC transporter, periplasmic substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
avi
Allorhizobium ampelinum
Pathway
avi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Avi_5512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avi02000
]
Avi_5512
Transporters [BR:
avi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Avi_5512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
TAT_signal
DUF5336
Motif
Other DBs
NCBI-ProteinID:
ACM38621
UniProt:
B9K173
LinkDB
All DBs
Position
2:complement(506945..508126)
Genome browser
AA seq
393 aa
AA seq
DB search
MLVTINRRTFMGTAAGVAGLGLLPRLGMAAPKQPASPVTVTVADVAGNLALTQGMFEKYA
AAKPQWVSRFAFTKAPAPELPSKLKAQQAAGKVDIDLVLTGTDALAAGLSQGLWVDLSAH
KADLPDLEKILLPQAFKMQALAQNQGVVVTYYPSGPLIEYMPDRVKQVPGTAEELLAWTK
ANPKRFMYARPANSGPGRTFLMGLPYLLGDKDPKDPVNGWAKTWDYLKAIGENVEYYGTG
TTQVMKELGEGTRDIVVTTTGWDINPRVLGIVPEEAKVATLKGFHWVTDAHYAVIPKGVS
EEKLAVLLDVINFILQPQQQAIAFDDGYFYPGPAVKDVTISMAPQKSQDAIAEFGRKEYD
GWIANNPLEVPLDPSKIVDAFRIWDEKIGAAKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgacgatcaatagaagaacattcatgggcacggccgctggtgtggccgggctc
ggcctgttgccgcgtctaggcatggcagcccccaaacaaccggcaagtcctgtcactgtt
accgtcgctgatgtggcgggcaacttggcgttgacccagggcatgttcgagaaatatgct
gcggcaaagccgcaatgggtgtcgcgttttgccttcacaaaggcccctgccccggaactg
ccatcaaagcttaaagcgcaacaggcagccggaaaagtcgatatcgacctggtgctgacc
ggtacggatgcgctggccgctggcctttcgcaagggctttgggtcgatttgtccgcccat
aaggcagacctgccggatctggagaaaatcctgctgccgcaggctttcaagatgcaggcg
ctggcccagaaccagggcgtcgtcgtcacctattatccgtctgggccgttgatcgaatat
atgcctgacagggtcaagcaggtgccgggcaccgccgaggaattgctggcctggaccaag
gccaatcccaagcgcttcatgtatgcccgccctgccaattccgggccaggtcggacattc
ctgatgggtcttccttacctgctgggtgataaagacccgaaagatccggtcaatggctgg
gccaagacctgggattacctgaaggcaatcggcgaaaacgtcgaatattacggcaccggc
accacgcaggtgatgaaggagcttggcgaaggcacccgcgatattgtcgtcaccaccact
ggctgggacatcaacccgcgcgtgctcggcatcgtgccggaagaggccaaggtggcaacc
ctcaagggcttccattgggtcactgacgcccattacgccgtcattccgaagggagtttcg
gaagaaaagctcgcggttctgctggatgtaatcaatttcattcttcagccgcagcaacag
gcgattgcctttgacgatggctatttctatcccggcccggcggtcaaggatgtgacgatt
tccatggcgcctcaaaagagccaggacgccatcgccgaatttggccgcaaggaatatgac
ggctggatcgccaataacccgctggaagtgccgctcgatccatcgaaaatcgtcgatgcc
ttccgcatctgggacgaaaagatcggcgcagccaagggctga
DBGET
integrated database retrieval system
