Allorhizobium ampelinum: Avi_5613
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Entry
Avi_5613 CDS
T00851
Name
(GenBank) ABC transporter substrate binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
avi
Allorhizobium ampelinum
Pathway
avi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Avi_5613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avi02000
]
Avi_5613
Transporters [BR:
avi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Avi_5613
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACM38708
UniProt:
B9K1G0
LinkDB
All DBs
Position
2:complement(628369..629556)
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AA seq
395 aa
AA seq
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MSGVLYLDPFRRPMMNRRDFLLASCATAGLAAVPNFAFAAGKEINVYSGSDANIIDFWNN
IVRPSFEKANSDLTIKVIDAGDNNGLRAIGDRALAALKSNNDPQADLFEAFNPRLPTGSI
DAGLWVAFSEKNVPNFGRVNPMAIDLSQSLPYRGSQVLLAYDSTKLDPKDAPKTWEQLIA
WIKANPGQFIYNRPDKGGSGGNFVRRAIHEANGRDPSKFTVSNYTAEAAEKALPPSWKIL
NDLAPSLYEKGAYTSGNSQSIQLLAQGVVTMVPVWSDQALQSIAQGVLPDTTRLVQLTDL
ALCGDFARMTIFSNGANKDAALKLANTLLSEEIQSAIITELGGFPGVSWDYISKDLREKY
ADVIPASIPTFPSGDWEMAVNDGWFRNVAPGLARG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggttttatatctcgacccatttcggagaccgatgatgaacagacgcgacttt
ctgctagcttcctgcgcaaccgcaggcttggccgccgtgccgaattttgcctttgctgcg
ggcaaggaaatcaatgtctacagcggctccgatgccaatatcatcgacttctggaacaac
atcgttcgcccaagcttcgagaaggccaacagtgacctgacgatcaaggtgattgatgcc
ggcgacaataacggtctgcgtgcgattggtgatcgcgccctcgccgccttgaaatccaac
aacgatccgcaggcagacctgtttgaagccttcaatccgcgcctgccaaccggctccatc
gatgccggtctctgggtggcattttccgagaagaatgtccccaatttcggccgcgtcaac
ccgatggcgatcgatctgtcgcagtcgctgccctatcgcggttcgcaggttcttctggcc
tatgacagcaccaagctcgatccgaaggatgcgccgaaaacctgggaacagctgattgcc
tggatcaaggccaatcccggccagttcatttacaaccgccccgacaagggcggttcaggc
ggcaatttcgtccgccgtgccatccacgaagcgaatggccgcgatccgagcaaattcacc
gtcagcaattacacggcggaagccgcggaaaaagccttgccgccaagctggaagatcctc
aacgatctggccccgtcgctttatgaaaagggcgcctatacctccggcaattcgcagtcg
atccagctgcttgcccaaggcgtcgtcaccatggtaccggtctggtccgatcaggcgctg
caatcgattgcccagggcgtgctgcccgacacaacacggcttgtgcagctgacggatctg
gcgctttgcggcgatttcgcccgtatgacgattttttccaatggcgccaacaaggatgcc
gccctgaagctcgccaatactttgctgtctgaagaaatccagtcggcaatcatcaccgag
cttggtggctttccgggtgtgtcctgggattatatttccaaggacctgcgcgagaaatat
gccgatgtcattcccgcatcgatcccgacattccccagcggcgattgggaaatggcggtc
aatgacggctggttccgcaatgtcgcaccaggcctggcgcggggttga
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