Allorhizobium ampelinum: Avi_5641
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Entry
Avi_5641 CDS
T00851
Name
(GenBank) ABC transporter substrate binding protein (oligopeptide)
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
avi
Allorhizobium ampelinum
Pathway
avi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Avi_5641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avi02000
]
Avi_5641
Transporters [BR:
avi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Avi_5641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACM38730
UniProt:
B9K1I2
LinkDB
All DBs
Position
2:666247..667773
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AA seq
508 aa
AA seq
DB search
MVHARFFKPGTLRRIALMTLAATTVSLVGPGLATAAQRTLTLGMNIEPTGLDPTVAAPVA
IGQVTWQNIFEGLVAIDRDGKIVPQLAKSWEISPDGLTYTFKLQEGVTFHDGEAFDSSVA
KFTLDRARGPDSTNGQKRFFSAIDSIETPDKATLVLKLKEPAGSLLYWLGWPASVMVAPK
TAADDKTNPIGTGPFKFVSWTKGDRVELAANPDYWNKQVKLGLDKVVFRFIPDAQAQAAA
LKSGGVDAFPEFSAPELMDSFKDDAKLATVVGNTELKVVAGMNNTRKPFNDKRVRQALMM
AIDRSTLVEGAWSGYGTVIGSHYTPNDPGYIDTTKVLPYNPEKAKELLEEAGYPNGFSFT
IKTPQMTYAPRSAEIMQAMLAEIGVTMTIEPTEFPGKWVSDVFKGTDYDMTIVAHAEPMD
IDIYARDPYYFNYKNPVFNETIKKIQATSDPAAQATLYGQAQQILAEDVPALYLFVMPKL
GVWNKKIKGLWENEPIPANVLSQVYWED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgcacgctttttcaagccgggcactttgcgtcgcatcgcgttgatgacgctg
gcggcgacgacggtgtcgcttgtcggtcccggcctggcgacggcggcccaaaggacgttg
acactcggcatgaatatcgagccgactgggcttgatccgacggtggcagcccctgtggcc
atcggccaggtgacctggcagaatattttcgaagggctggttgccatcgaccgtgacggc
aagatcgtgccgcagctggcgaaaagctgggagatctcccccgacggcctcacctataca
ttcaagctccaggagggtgtgaccttccacgatggtgaggcgtttgattcctccgtggcg
aaattcacgctcgaccgggcgcgaggcccagactcgaccaatggccagaaacggtttttt
agtgccatcgacagcatcgagacaccggacaaggcaacgctagtcttgaaactgaaggaa
ccagcgggctcgctgctctactggctgggctggcccgcctcggtgatggtggcgccgaaa
actgctgctgatgacaagaccaatcccatcggcacaggcccgttcaaattcgtcagctgg
accaagggcgaccgggtggagcttgccgccaaccctgattactggaacaagcaggtgaag
cttggcctcgacaaggtggtgttccgcttcattcccgatgctcaggcccaggcggcggcg
ctgaaatccggcggcgtcgatgcctttccagagttcagcgcgccggaactgatggacagt
ttcaaggacgacgccaagcttgcgactgtggtcggcaataccgagttgaaggtcgtggcg
ggcatgaacaacacccgcaagccgttcaacgacaagcgtgtgcgccaggcgctgatgatg
gcgattgatcgctcgacgctggtggaaggcgcctggtccggctatggcactgtgatcggc
agccattatacgccgaacgatccgggctatatcgataccaccaaggtcctgccctataac
ccggaaaaggccaaggagcttctggaggaggctggctatccaaacgggttcagcttcacc
atcaagaccccgcaaatgacctatgcgccgcgcagcgccgaaatcatgcaggccatgctg
gctgaaattggcgtgacgatgacgatagagcccaccgagtttccgggaaaatgggtgtcg
gacgtgttcaagggtacggattatgacatgaccatcgttgctcacgccgagccaatggat
atcgatatctatgcccgcgacccctattatttcaactataagaacccggtcttcaacgag
acgatcaagaagatccaggccacatccgatccggcggcccaggccacgctctacggtcag
gcgcaacagatcctggcggaggacgtacccgccctctatctgttcgtcatgccgaagctt
ggcgtgtggaacaagaaaatcaagggcttgtgggaaaacgaaccgatcccagccaatgtt
ttgtcacaggtgtattgggaggattga
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